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IGV
•
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0
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replies
169
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Unclear exon-exon connection after RSubjunc() usage
IGV
Rsubjunc
Rsubread
11 weeks ago
thomas.heigl.ibk
• 0
0
votes
0
replies
739
views
Gviz colour reads by Read Group in AlignmentTrack
gviz
igv
5.0 years ago
ido.idobar
• 0
0
votes
1
reply
712
views
reload IGV exported feature to Gviz
gviz
igv
5.9 years ago
ta_awwad
▴ 10
0
votes
0
replies
1.4k
views
IGV like plots with GViz
gviz
R
IGV
6.8 years ago
Deepak Tanwar
▴ 10
4
votes
3
replies
2.8k
views
Is there an R package providing an R API for IGV / igvtools out there?
package
IGV
updated 8.2 years ago by
Paul Shannon
▴ 470 • written 8.2 years ago by
Henrik Bengtsson
★ 2.4k
2
votes
5
replies
3.7k
views
A parser for Tiled Data File (TDF) format?
file format
parser
IO
TDF
IGV
8.2 years ago
Henrik Bengtsson
★ 2.4k
6 results • Page
1 of 1
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Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Leonard Goldstein
▴ 220
Looks like `sgv_pred` does not have the expected format. Was it created or edited manually? I would always recommend creating objects with …
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
pangtaihin
• 0
Thank you:)
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
by
pangtaihin
• 0
Thank you! But I apologize for cannot fully grasp your point. Do you mean that when the counts are high, rlogged matrix can represent the t…
Comment: Query regarding phyloseq object construct with QIIME output
by
Rosso
• 0
Constructing a phyloseq object from QIIME output involves several steps to integrate taxonomic abundance data, sample metadata, and phyloge…
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Marcel Ramos
690
`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…
Votes
Answer: Can DESeq2 rlog normalized matrix reflects time course result directly?
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
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