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MNN
•
reset
3
votes
6
replies
4.1k
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Carry over variable features when converting FastMNN SCE object to Seurat object
mnn
batchelor
scrna-seq
seurat
updated 5.4 years ago by
Aaron Lun
★ 29k • written 5.4 years ago by
heir_of_isildur88
• 0
2
votes
2
replies
2.6k
views
Subclustering after MNN batch-correction
batchelor
mnn
scrna-seq
updated 3.3 years ago by
Guandong Shang
▴ 40 • written 5.8 years ago by
heir_of_isildur88
• 0
0
votes
2
replies
1.3k
views
Help with the output from mnnCorrect
mnnCorect
MNN
6.1 years ago
sharvari gujja
▴ 40
2
votes
1
reply
2.9k
views
Batch Corrections (MNN) with TPM values
scRNA-Seq
scater
scran
rna-seq
MNN
updated 6.1 years ago by
Aaron Lun
★ 29k • written 6.1 years ago by
hamza_karakurt
▴ 60
4 results • Page
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Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Monkey Mart: The Ultimate Gaming Marketplace Experience https://monkeymart.one/
Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Enter the world of Monkey Mart, where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trad…
Comment: Highly DE genes but small count difference within conditions
by
shy.hippopotamus.yxmb
• 0
Enter the world of , where gaming meets innovation. We've created a cutting-edge marketplace that's transforming how gamers trade and conne…
Comment: copy number/LOH for Affy 100K
by
igkryycpinmshzugby
• 0
Hi John For copy number and LOH analysis from Affymetrix 100K SNP arrays you can use aroma.affymetrix or CRLMM packages in Bioconductor. …
Comment: Integration: Paired-end vs healthy single-end from a different source
by
igkryycpinmshzugby
• 0
Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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