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MNN
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reset
3
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6
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4.1k
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Carry over variable features when converting FastMNN SCE object to Seurat object
mnn
batchelor
scrna-seq
seurat
updated 5.5 years ago by
Aaron Lun
★ 29k • written 5.5 years ago by
heir_of_isildur88
• 0
2
votes
2
replies
2.6k
views
Subclustering after MNN batch-correction
batchelor
mnn
scrna-seq
updated 3.3 years ago by
Guandong Shang
▴ 40 • written 5.8 years ago by
heir_of_isildur88
• 0
0
votes
2
replies
1.3k
views
Help with the output from mnnCorrect
mnnCorect
MNN
6.1 years ago
sharvari gujja
▴ 40
2
votes
1
reply
2.9k
views
Batch Corrections (MNN) with TPM values
scRNA-Seq
scater
scran
rna-seq
MNN
updated 6.1 years ago by
Aaron Lun
★ 29k • written 6.1 years ago by
hamza_karakurt
▴ 60
4 results • Page
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Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
James W. MacDonald
68k
Note that `S4Vectors` contains source code, so you will also need to [install RTools first][1]. [1]: https://cran.r-project.org/bin/win…
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
shepherl
4.2k
Our windows binaries are currently lagging behind as we are currently do not have a windows builder. If you are on windows you can try ins…
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
by
shepherl
4.2k
Can you please provide your `sessionInfo()` after doing `library("S4Vectors")`
Comment: VariantAnnotation does escape = within header string quotes
by
Daniel Cameron
▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data
by
Alexander
• 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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