Biostar Dada2

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GenomeInfoDbData phyloseq dada2

8 days ago • updated 6 days ago ymtan • 0

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phyloseq dada2

5 months ago Manijeh • 0

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dada2

5 months ago Yoan • 0

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decipher dada2

updated 7 months ago by fabian.roger08 ▴ 10 • written 23 months ago by fabian.roger • 0

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dada2 Metagenomics DESeq2

updated 8 months ago by Michael Love 35k • written 8 months ago by GlycineMax • 0

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dada2

8 months ago • updated 7 months ago lh290 ▴ 20

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r dada2 Bioconductor

updated 8 months ago by Axel Klenk ▴ 980 • written 8 months ago by mschmidt ▴ 10

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DECIPHER dada2

9 months ago anrongloh • 0

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dada2 conda phyloseq

updated 10 months ago by James W. MacDonald 58k • written 10 months ago by Daniel • 0

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dada2 515F - 806Rd

22 months ago beginner87 • 0

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810

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DADA2 .fq

updated 3.0 years ago by James W. MacDonald 58k • written 3.0 years ago by mafusa20 • 0

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505

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dada2 biostrings

updated 3.5 years ago by James W. MacDonald 58k • written 3.5 years ago by gradypierroz • 0

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deseq2 dada2

updated 3.9 years ago by benjamin.j.callahan ▴ 50 • written 3.9 years ago by blastzone.heimerdinger ▴ 10

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bioconductor R dada2

updated 4.4 years ago by daniel.vantwisk ▴ 50 • written 4.4 years ago by rggriggs • 0

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dada2 GenomeInfoDbData

updated 4.6 years ago by jiangjing_ing • 0 • written 4.6 years ago by navlern • 0

15 results • Page 1 of 1

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Comment: Weird output of DESeq2 when using single sample from one group agains the other by Michael Love 35k

See the 2014 paper, the MLE LFC is found via IRLS: "We use the standard iteratively reweighted least-squares algorithm [12] for each gene’…

Comment: Weird output of DESeq2 when using single sample from one group agains the other by FantasticAI • 0

Thank you for the help. Sorry for keep asking silly questions: I wonder given 2 groups (A and B), and each group has 6 samples, how does th…

Answer: DESeq2 Responder vs Non-Responders nested design by Michael Love 35k

Unfortunately, I have to reserve my time on the support site for software related questions. For consultation about statistical design and …

Comment: How to use subjunc for differential splicing analysis? by Assa Yeroslaviz ★ 1.5k

I assume, that it would make more sense to quantify the reads based on the gene-level and not the exon-level, following by using the `diffS…

Comment: Reading large file (15GB) in R by nabiyogesh • 0

Thanks Sean, I am getting below error with fread, I am running this on HPC with 500GB. > library(data.table) data.table 1.14.2 u…

Votes

Where can I find EnsDb.Hsapiens.v105?

Two-way interaction, linear redundancy

Answer: Housekeeping genes vary across contrast groups, using DESeq2 on NanoString data

Answer: Joint disperstion estimation for DEXSeq and DESeq2

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