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Pd info package affy 10K array
Microarray Annotation Network Cancer cdf probe affy Microarray Annotation Network Cancer
17.3 years ago Henrik Bengtsson ★ 2.4k
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Employment opportunities
Network Cancer Network Cancer
17.4 years ago Martin Morgan 25k
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Example of converting graphNEL object to ajacency matrix?
Network convert Network convert
updated 17.5 years ago by ★ 5.5k • written 17.5 years ago by ▴ 50
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Postdoc in Computational Systems Biology
Network Network
17.6 years ago Jan T. Kim ▴ 70
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Questions of package "deal"
Network Bayesian Network Bayesian
17.6 years ago Tu Kang ▴ 20
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made4, memory issues
Network Clustering Cancer Yeast made4 Network Clustering Cancer Yeast made4
18.0 years ago Aedin Culhane ▴ 510
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GOENTREZID2GO hard-coded in GOstats:makeGOGraph
Annotation GO Network Yeast graph GOstats Annotation GO Network Yeast graph GOstats
updated 18.9 years ago by ★ 7.4k • written 18.9 years ago by ★ 1.1k
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Greek characters and subscripts in network graphs
Network Rgraphviz Network Rgraphviz
18.9 years ago Martin Henry H. Stevens ▴ 10
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BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
19.1 years ago Seth Falcon ★ 7.4k
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Postdoctoral Fellowship opportunity at Rosetta Inpharmatics, Seat tle, WA
Pathways Network Cancer Pathways Network Cancer
19.2 years ago Rohl, Carol A ▴ 10
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[SPAM?] Bioconductor Digest, Vol 41, Issue 22 (Out of Office)
SNP Microarray Annotation GO Network Clustering Survival Cancer hgu133a cdf probe affy
19.3 years ago Todd Nick ▴ 10
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Problem downloading Bioconductor
Network Network
19.4 years ago Seth Falcon ★ 7.4k
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B value cutoff in LIMMA
Network Cancer limma Network Cancer limma
19.6 years ago Gordon Smyth 53k
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no connection to biol
Network Network
19.7 years ago Francois Pepin ★ 1.3k
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Drawing network graphs (i.e. nodes and edges)
Network Network
updated 19.7 years ago by ▴ 360 • written 19.7 years ago by ▴ 170
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need a neural network package for microarray data analysis
Microarray Network Microarray Network
19.9 years ago Stephen Henderson ★ 1.0k
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Bug in maNormNN
Microarray Normalization GO Visualization Network nnNorm Microarray Normalization GO
20.0 years ago Tarca, Adi ▴ 570
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help with bayesian network
Network Bayesian Network Bayesian
20.1 years ago goldoni ▴ 10
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Affymetrix MASv5 code & sample data
Network Network
updated 20.4 years ago by ★ 1.8k • written 20.4 years ago by ▴ 50
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Problems with using getBioC
Network Network
20.9 years ago Brian D M Tom ▴ 50
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Many ways to skin a cat: The malaria microarray data set
Annotation Network Clustering Annotation Network Clustering
21.1 years ago Simon Lin ▴ 210
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training in bioconductor, boston, 28-29 june (2d announcement)
Microarray Network oligo Microarray Network oligo
21.5 years ago Vincent J. Carey, Jr. 6.7k
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Boston Bioconductor Training Course Dates: 28-29 June 2004
Microarray Network oligo Microarray Network oligo
21.6 years ago Vincent J. Carey, Jr. 6.7k
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postdoc available
Pathways Network Classification Cancer Pathways Network Classification Cancer
21.8 years ago Jean-Philippe Vert ▴ 10
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R performance questions
Network Network
21.9 years ago alessandro.semeria@cramont.it ▴ 80
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JOB: Biostatistican
Microarray Genetics Proteomics Network Kidney Microarray Genetics Proteomics Network
22.1 years ago Robert Campanell ▴ 10
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Biocore response to Affymetrix data format changes
Microarray GO Network Cancer cdf affy PROMISE Microarray GO Network Cancer cdf affy
22.3 years ago Kulp, David ▴ 20
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Last call for Spring Affy Software Developers' Conferences
SNP Network SNP Network
22.5 years ago DevNet ▴ 20
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Affymetrix Software Development Conference Early Registration rat es - final days
SNP GO Network BEAT SNP GO Network BEAT
22.5 years ago DevNet ▴ 20
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Re: Try to run a lots of chips: 32 bits vs 64 bits
Normalization GO Network Normalization GO Network
updated 22.7 years ago by ▴ 530 • written 22.7 years ago by ▴ 430
180 results • Page 4 of 4
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Comment: DESeq2 for candidate gene analysis by piffelpaff ▴ 10
thank you so much for answering Dr. Love!
Answer: DESeq2 for candidate gene analysis by Michael Love 43k
Your plan 1 is reasonable. Run DESeq2 on the whole dataset to obtain size factors and moderated dispersion estimates and then extract the u…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
Oh. ``` > z <- read10xCounts(c(tmpdir, tmpdir), mtx.class = "SVT_SparseMatrix", delayed = TRUE) > class(counts(z)) [1] "DelayedMatrix" att…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in by James W. MacDonald 68k
That's weird. Using the example data works for me. ``` > example(read10xCounts) rd10xC> # Mocking up some 10X genomics output. rd10xC> ex…
Comment: Join BOC Sciences at Drug Discovery Chemistry by teamardigen • 0
Sounds like an exciting event for anyone passionate about small molecule innovation. The focus on discovery and optimization really drives …
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Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Join BOC Sciences at Drug Discovery Chemistry
Drug datasets for RNA-seq
Comment: Check removeBatchEffect effectiveness
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