Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Paired design
•
reset
2
votes
5
replies
1.6k
views
DESeq2 problem with outlier replacement in paired multi-factor design
deseq2
differential gene expression
multiple factor design
paired design
7.3 years ago
gregory.l.stone
▴ 10
2
votes
2
replies
1.3k
views
EdgeR User Guide: use of glmLRT vs glmQLF in oral carcinoma Case Study
edger
design matrix
glmlrt()
glmQFTest()
paired design
5.5 years ago
oakhamwolf
• 0
3
votes
4
replies
1.2k
views
Complicated unbalanced block DOE with partially paired samples and analysis
limma
complex-design
paired design
updated 6.1 years ago by
Aaron Lun
★ 28k • written 6.1 years ago by
ML18
▴ 10
1
vote
3
replies
1.0k
views
Setting up the design for paired analysis
edger
limma
paired design
5.4 years ago • updated 5.3 years ago
candida.vaz
▴ 50
2
votes
3
replies
856
views
Drug response pre- and post-treatment between timepoints across conditions
RNA-seq
Paired design
Timecourse
Diagnosis
Covariates
updated 4.1 years ago by
Kevin Blighe
★ 3.9k • written 4.1 years ago by
ibrahim.akkouh
• 0
4
votes
3
replies
1.1k
views
Differential profile for only one normal - tumor pair
edger
degs
paired design
updated 5.8 years ago by
Gordon Smyth
50k • written 5.8 years ago by
takumima
▴ 10
3
votes
3
replies
1.4k
views
Difficulties with probable batch effect in paired blocked (treatment and placebo) experiment
deseq2
edger
limma
batch effect
paired design
6.1 years ago
Vladimir Krasikov
▴ 90
7 results • Page
1 of 1
Recent ...
Replies
Answer: DESeq2 v1.35.0
by
Michael Love
41k
That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
by
James W. MacDonald
65k
Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.
Answer: DESeq2 v1.35.0
by
James W. MacDonald
65k
Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…
Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
by
fatinataly
• 0
I tried also with oligo does not work, any other suggestion?
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ian D.
▴ 70
Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
Awards
• All
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Popular Question
to
shepherl
3.9k
Popular Question
to
siajunren
• 0
Scholar
to
Rory Stark
★ 5.2k
Locations
• All
European Union,
just now
France,
14 minutes ago
United States,
43 minutes ago
United States,
1 hour ago
United States,
1 hour ago
Traffic: 714 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6