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PolyPhen
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Help with installing Biocmanager
pd.rabgene.1.0.st
PolyPhen
updated 2.5 years ago by
ATpoint
★ 4.2k • written 2.5 years ago by
cyb.95521
• 0
0
votes
2
replies
2.3k
views
ensemblVEP, variant_effect_predictor versions and release schedule
Transcription
HapMap
PolyPhen
SIFT
convert
genomes
ensemblVEP
Transcription
HapMap
SIFT
updated 10.5 years ago by
Valerie Obenchain
★ 6.8k • written 10.6 years ago by
Thomas Sandmann
▴ 30
0
votes
0
replies
1.3k
views
zero-row result breaks select() on PolyPhen.Hsapiens.* and SIFT.Hsapiens.*
VariantAnnotation
Annotation
PolyPhen
SIFT
annotate
VariantAnnotation
ensemblVEP
Annotation
10.7 years ago
Valerie Obenchain
★ 6.8k
0
votes
4
replies
1.4k
views
zero-row result breaks select() on PolyPhen.Hsapiens.* and SIFT.Hsapiens.*
Annotation
PolyPhen
SIFT
Annotation
PolyPhen
SIFT
updated 10.8 years ago by
Valerie Obenchain
★ 6.8k • written 10.9 years ago by
Robert Castelo
★ 3.3k
0
votes
0
replies
1.1k
views
Useful information about Ensembl release 72 mart databases
PolyPhen
PolyPhen
11.1 years ago
Thomas Maurel
▴ 800
0
votes
0
replies
1.6k
views
Useful information about Ensembl release 71 mart databases
zebrafish
PolyPhen
SIFT
affy
genomes
zebrafish
PolyPhen
SIFT
affy
genomes
11.3 years ago
Thomas Maurel
▴ 800
0
votes
1
reply
1.5k
views
Useful information about Ensembl release 67 mart databases
miRNA
GO
Caenorhabditis elegans
Sus scrofa
zebrafish
PolyPhen
SIFT
miRNA
GO
Sus scrofa
12.2 years ago
Thomas Maurel
▴ 800
7 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Lluís Revilla Sancho
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maltethodberg
▴ 180
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Michael Love
42k
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Leonardo Collado Torres
★ 1.1k
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Gordon Smyth
51k
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