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Proteome
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analysis of overexpressed proteins in metaproteomes
Proteomics
ProteoMM
ProteomicsWorkflow
Proteome
written 5 months ago by
ary.lech
▴ 10
2
votes
6
replies
770
views
Biostrings error at retrieving protein sequences
SequenceMatching
Biostrings
DifferentialExpression
Proteome
updated 7 months ago by
Hervé Pagès
16k • written 7 months ago by
nromerov
• 0
0
votes
1
reply
479
views
catagorization of proteins
Proteome
ProtGenerics
written 19 months ago by
bansalheena10
• 0
0
votes
0
replies
560
views
Outliers
Proteomics
Proteome
updated 19 months ago by
ATpoint
★ 4.1k • written 19 months ago by
bansalheena10
• 0
0
votes
0
replies
751
views
ProteoMM analysis with two replicates
shotgunproteomics
Proteome
proteomics
Proteomics
ProteoMM
2.1 years ago
ary.lech
▴ 10
1
vote
7
replies
3.1k
views
How can I convert the "Majority protein IDs" to "Gene names" (example below shown)?
MassSpectrometryData
Proteome
Database
DEP
3.1 years ago
tpm
• 0
1
vote
0
replies
1.5k
views
News:
Online training - Proteomics in R and Bioconductor
ProteomicsWorkflow
proteomics
Proteome
3.4 years ago
info
▴ 10
0
votes
1
reply
1.1k
views
R package to change protein *.msf file to any readable file
Proteome
ProteomicsWorkflow
proteomics
updated 3.4 years ago by
swbarnes2
★ 1.3k • written 3.4 years ago by
yueli7
▴ 20
0
votes
5
replies
2.4k
views
mRNA-seq cross-species analysis, is it possible?
Genetics
Normalization
Proteome
DESeq
Genetics
Normalization
Proteome
DESeq
updated 12.8 years ago by
Davis McCarthy
▴ 20 • written 12.8 years ago by
mali salmon
▴ 370
0
votes
0
replies
808
views
BSgenome data package of the human proteome: Does it exist?
Proteome
Proteome
14.6 years ago
Tillinghast, Guy, M.D.
▴ 30
0
votes
2
replies
1.7k
views
I: Two way anova or manova?
Proteome
Proteome
updated 16.8 years ago by
Mª José Nueda
▴ 90 • written 16.8 years ago by
simonegri@alice.it
▴ 20
11 results • Page
1 of 1
Recent ...
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Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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