Showing : QuasR Error • reset
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QuasR qQCReport error
QuasR qQCReport QuasR error Error in .normarg_totalsize(totalsize)
4.9 years ago A.Singh • 0
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Error in checkForRemoteErrors(val) : QuasR: can't pass alignment parameters
quasR quasr error alignmentparameters quasr
6.0 years ago Amer Ghalawinji • 0
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QuasR - preprocessReads fails with a SRFilterResult error
quasr quasr error
7.8 years ago jlncrnt ▴ 10
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RNA Seq // QuasR : Error while extracting unmapped reads
quasr quasr error paired-end reads rnaseq
7.9 years ago guillaume.dachy • 0
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Error: The specified genome ./data/BSgenome.Hsapiens.UCSC.hg19 does not have the extension of a fasta file (fa,fasta,fna)
quasr error
updated 8.7 years ago by ▴ 400 • written 8.7 years ago by • 0
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QuasR error usign preprocessReads
quasr error
8.8 years ago Paul Ríos • 0
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1.6k
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package install error package is not available
quasr error
updated 8.8 years ago by 25k • written 8.8 years ago by ▴ 10
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Question: qCount in QuasR for RNAseq quantification
quasr error
updated 8.9 years ago by ▴ 400 • written 8.9 years ago by ▴ 10
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(QuasR Error) Error in checkForRemoteErrors(val) : one node produced an error: bowtie failed to perform the alignments
QuasR Error
8.9 years ago tarek.mohamed ▴ 10
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Comment: CleanUpRNAseq with a GTF that is missing mitochondria annotation data by rcreed • 0
The updated version worked well on my data. Thank you!
Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di by James W. MacDonald 67k
The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…
Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Votes
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
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