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QuasR Error
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(QuasR Error) Error in checkForRemoteErrors(val) : one node produced an error: bowtie failed to perform the alignments
QuasR Error
8.3 years ago
tarek.mohamed
▴ 10
2
votes
4
replies
2.3k
views
Question: qCount in QuasR for RNAseq quantification
quasr error
updated 8.3 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.3 years ago by
tarek.mohamed
▴ 10
1
vote
0
replies
1.6k
views
QuasR - preprocessReads fails with a SRFilterResult error
quasr
quasr error
7.2 years ago
jlncrnt
▴ 10
0
votes
5
replies
1.5k
views
package install error package is not available
quasr error
updated 8.3 years ago by
Martin Morgan
25k • written 8.3 years ago by
maedakus
▴ 10
1
vote
2
replies
1.4k
views
QuasR error usign preprocessReads
quasr error
8.3 years ago • updated 8.2 years ago
Paul Ríos
• 0
1
vote
2
replies
1.3k
views
Error in checkForRemoteErrors(val) : QuasR: can't pass alignment parameters
quasR
quasr error
alignmentparameters
quasr
5.4 years ago
Amer Ghalawinji
• 0
0
votes
1
reply
1.3k
views
Error: The specified genome ./data/BSgenome.Hsapiens.UCSC.hg19 does not have the extension of a fasta file (fa,fasta,fna)
quasr error
updated 8.2 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 8.2 years ago by
ezgi_can00
• 0
0
votes
0
replies
936
views
RNA Seq // QuasR : Error while extracting unmapped reads
quasr
quasr error
paired-end reads
rnaseq
7.3 years ago
guillaume.dachy
• 0
0
votes
2
replies
731
views
QuasR qQCReport error
QuasR qQCReport
QuasR error
Error in .normarg_totalsize(totalsize)
4.3 years ago
A.Singh
• 0
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Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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