Showing : RIPSeeker • reset
1
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1.5k
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Bioconductor-RipSeeker
RipSeeker RIp-seq
updated 2.9 years ago by 67k • written 2.9 years ago by • 0
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726
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RIPSeeker error regarding binSize, only for control samples
ripseeker
6.5 years ago fitzgeraldd424 • 0
0
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0
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841
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RIPSeeker problem with the ripseek command
ripseeker AgoIP RIPSeek
6.9 years ago ximena.garate • 0
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0
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819
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Rippseeker problem with allocate space
RIP ripseek ripseeker
6.9 years ago jarod_v6@libero.it ▴ 40
8
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8
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3.4k
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biomaRt: drerio_gene_ensembl dataset missing
biomart ensembl ripseeker
updated 7.0 years ago by ★ 6.6k • written 7.0 years ago by ▴ 510
1
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1
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1.2k
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RIPseeker peak calling parameters for TruSeq Samll RNA stranded library
RIPseeker RIP rna-seq
7.7 years ago ofonov ▴ 10
0
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1
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1.7k
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RIPSeeker ripSeek does not produce any output
RIPSeeker ripSeek RIP
7.7 years ago ofonov ▴ 10
0
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0
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928
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Setting up analysis for RIPSeeker correctly
ripseeker
8.3 years ago snamjoshi87 ▴ 40
2
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1
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1.6k
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RIPSeeker error Error in NSBS(i, x, exact = exact, upperBoundIsStrict = !allow.append) : subscript contains NAs or out-of-bounds indices
ripseeker
8.8 years ago • updated 8.5 years ago xfwang ▴ 20
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4
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2.5k
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an annotation error when using RIPSeeker
RIPSeeker biomart
8.9 years ago • updated 8.8 years ago xfwang ▴ 20
2
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5
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2.5k
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convert GAlignmentPairs to GAlignment
GAlignmentPairs galp2gal RIPSeeker
9.7 years ago tomas.bjorklund ▴ 20
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0
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1.0k
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Advice to RIPSeeker users to improve RAM and CPU use
RIPSeeker RIPSeeker
11.1 years ago Davis, Wade ▴ 350
1
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3
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2.9k
views
Problem with RIPSeeker
biomaRt RIPSeeker biomaRt RIPSeeker
updated 11.3 years ago by ▴ 510 • written 11.3 years ago by ▴ 30
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0
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1.5k
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RIPSeeker multicore option not working fully?
GO biomaRt RIPSeeker GO biomaRt RIPSeeker
11.3 years ago Davis, Wade ▴ 350
0
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2
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1.4k
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RIPSeeker multicore option not working fully?
Annotation GO RIPSeeker Annotation GO RIPSeeker
updated 11.3 years ago by ★ 8.2k • written 11.3 years ago by ▴ 350
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0
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1.4k
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RIPSeeker package import error
RIPSeeker RIPSeeker
11.5 years ago Endre Sebestyen ▴ 10
16 results • Page 1 of 1
Recent ...
Replies
Answer: Deseq2 res Function by Michael Love 43k
> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…
Answer: ANOVA like approach of edgeR by Gordon Smyth 51k
You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…
Answer: Create Illmina bead summary data by Gordon Smyth 51k
GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…
Comment: Help with RSEM counts: do I transpose matrix? by NB • 0
OK thank you.
Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k
You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.
Votes
Answer: Deseq2 res Function
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
Answer: ANOVA like approach of edgeR
Answer: ANOVA like approach of edgeR
Comment: ANOVA like approach of edgeR
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