Bioconductor RRBS

Showing : RRBS • reset

votes

replies

1.7k

views

edgeR model-selection RRBS mixture-experiment

4.9 years ago ingerslev • 0

votes

replies

1.4k

views

MethylCC RRBS cord blood

5.6 years ago weichen-cls • 0

votes

replies

1.2k

views

Biseq Methylation DMP DMR RRBS

5.6 years ago i.s.castanho • 0

votes

1.1k

views

biseq betaRegression RRBS Methylation

5.9 years ago i.s.castanho • 0

votes

replies

3.1k

views

edgeR rrbs

updated 7.2 years ago by Gordon Smyth 53k • written 7.2 years ago by ingerslev • 0

votes

replies

3.5k

views

methykit rrbs

updated 7.8 years ago by Mike Smith ★ 6.6k • written 7.8 years ago by bekah ▴ 40

votes

replies

2.2k

views

edgeR methyation RRBS

updated 8.1 years ago by Gordon Smyth 53k • written 8.1 years ago by osa.zuta ▴ 40

votes

1.6k

views

biseq RRBS betaregression

8.9 years ago l.eijssen • 0

vote

replies

2.7k

views

sva RRBS

updated 9.0 years ago by Jeff Leek ▴ 650 • written 9.0 years ago by mrodrigues.fernanda ▴ 10

votes

replies

2.3k

views

rrbs batch effect methylation sva

updated 9.4 years ago by dashbrook1 • 0 • written 10.6 years ago by GFM ▴ 20

votes

replies

2.0k

views

limma rrbs bsseq

updated 9.7 years ago by Aaron Lun ★ 29k • written 9.7 years ago by nhejazi • 0

votes

replies

2.8k

views

biseq RRBS SAAP-BS coverage

10.9 years ago • updated 10.8 years ago maria.maqueda • 0

12 results • Page 1 of 1

Recent ...

Replies

Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k

Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…

Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0

Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…

Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

Votes

Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?

Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

Awards • All