Bioconductor TCGAutils

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584

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TCGAutils

updated 7 weeks ago by James W. MacDonald 68k • written 7 weeks ago by xiaofeiwang18266 ▴ 50

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929

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normalization RNASEQ Normalization TCGAutils TCGA

updated 2.3 years ago by ATpoint ★ 4.7k • written 2.3 years ago by Deniz • 0

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2.3k

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MultiAssayExperiment curatedTCGAData TCGAutils

4.2 years ago svlachavas ▴ 840

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1.5k

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MultiAssayExperiment curatedTCGAData TCGAutils

updated 4.3 years ago by Marcel Ramos 700 • written 4.3 years ago by svlachavas ▴ 840

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1.6k

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MultiAssayExperiment curatedTCGAData TCGAutils

updated 4.3 years ago by Marcel Ramos 700 • written 4.4 years ago by svlachavas ▴ 840

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4.9k

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TCGAutils TCGAbiolinks GenomicDataCommons

updated 5.6 years ago by Marcel Ramos 700 • written 5.7 years ago by Dario Strbenac ★ 1.6k

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930

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TCGAutils

updated 5.9 years ago by Levi Waldron ★ 1.1k • written 5.9 years ago by vittorio.fortino • 0

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1.7k

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TCGAutils multiassayexperiment coad

updated 6.7 years ago by Marcel Ramos 700 • written 6.7 years ago by mario.zanfardino ▴ 160

8 results • Page 1 of 1

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Comment: concentration tables suitable as input for new packages? by wilkinson • 0

I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…

Answer: Warning message---BiocManager::install by wilkinson • 0

It seems like you already have the most recent [basketball stars][1] version of that package. You should be able to use the package without…

Answer: org.Hs.eg.db issue by wilkinson • 0

@[Geometry Dash][1] successfully installed R on a another computer. so, the issue is likely not related to R [1]: https://geometryd…

Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k

Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Hoover • 0

I got it! ([Drift Boss][1]) [1]: https://driftbossgame.co

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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Popular Question to Lluís Revilla Sancho ▴ 760