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bioconductor amazon ami cloud

updated 6.6 years ago by shepherl 3.4k • written 6.6 years ago by kdkorthauer • 0

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BiocParallel amazon

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amazon cloud

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aws bioconductor aws ami amazon

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amazon bioconductor aws s3 oligo package affybatch

4.8 years ago perdedorium • 0

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Answer: Library sizes of miRNA sequencing data and TMM normalization with Edge-R by Gordon Smyth 47k

Choosing which samples to normalize together is not dependent on library size but rather on (1) whether the tissue samples are comparable a…

Comment: Atena package - error (new user) by lalanis1 • 0

Thanks a lot, Calvo. Will run my files with revised version soon! Best regards, Lalani

Comment: Nested paired design with covariates in limma by Gordon Smyth 47k

Please post a new question with enough detail to answer your question. If you want bespoke advance, then you need to post the details of yo…

Comment: Question about GWASTools gdsSubset by Stephanie M. Gogarten ▴ 840

You could see if an attribute has been set on the genotype node indicating the order: ``` > library(gdsfmt) > gdsfile <- system.file("extda…

Comment: Nested paired design with covariates in limma by Nathan • 0

Hello Ibrahim, Gordon (this is an extension of the question) I have a data set that is similarly nested in subject (like "Subject_ID" abov…

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Comment: Question about GWASTools gdsSubset

Comment: How to normalize long-read RNA-seq data for comparison with short-reads

Answer: Question about GWASTools gdsSubset

Answer: EdgeR model matrix

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