Biostar Ami

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155

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Release release AWS AMI Bioconductor

updated 10 weeks ago by Vincent J. Carey, Jr. 6.5k • written 10 weeks ago by shepherl 2.8k

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400

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RStudio AWS AMI

2.0 years ago bio-explorer • 0

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640

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aws bioconductor aws ami amazon

updated 3.8 years ago by shepherl 2.8k • written 3.8 years ago by neal ▴ 10

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783

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AMI rstudio server

updated 4.1 years ago by shepherl 2.8k • written 4.2 years ago by Thomas Sandmann ▴ 80

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1.2k

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AMI

updated 4.4 years ago by Dan Tenenbaum ★ 8.2k • written 4.4 years ago by spollack • 0

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899

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bioconductor amazon ami cloud

updated 5.0 years ago by shepherl 2.8k • written 5.0 years ago by kdkorthauer • 0

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717

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ami

updated 5.6 years ago by Dan Tenenbaum ★ 8.2k • written 5.6 years ago by joshmobrien • 0

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1.1k

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ami starcluster biocparallel sge AWS

5.8 years ago n.huckle ▴ 30

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1.7k

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AMI RStudio upload error custom install

updated 6.5 years ago by Dan Tenenbaum ★ 8.2k • written 6.5 years ago by nicholas.provart • 0

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Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Michael Love 33k

Q1: No I meant just use your results from above that you called "the first way". Not sub-setting, as you will have worse dispersion estimat…

Comment: Best practice for quantifying sncRNA by Abhishek • 0

I wonder what would be a good metric to assess the quantification quality

Comment: Best practice for quantifying sncRNA by Abhishek • 0

Thank you for sharing your thoughts. I used Salmon and indexed using hg38 gencodes transcriptome. After the tximport step, I ended up gett…

Comment: DESeq2 question: why I got discrepancy results for DEGs when using different way by Ming ▴ 350

Thx so much for the diagnosis and advice. Indeed, in my data, some genes have all 0 for all sampes of a contrast for both "Mut" and "WT" gr…

Comment: Best practice for quantifying sncRNA by Steve Lianoglou 13k

> It's my opinion that miRNA is a mirage intended to make MDs salivate and biostatisticians wail in misery, but what do I know? I'll tell …

Votes

Comment: Idea: Using DESeq2 to test a change in ratio of two genes

Time Series Analysis

Comment: Time series DE gene analysis with edgeR where specific timepoints have NA levels

Answer: Time series DE gene analysis with edgeR where specific timepoints have NA levels

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