Bioconductor Amazon

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amazon bioconductor aws s3 oligo package affybatch

6.6 years ago perdedorium • 0

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aws bioconductor aws ami amazon

updated 7.1 years ago by shepherl 4.1k • written 7.1 years ago by neal ▴ 10

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amazon cloud

updated 8.1 years ago by Valerie Obenchain ★ 6.8k • written 8.1 years ago by Thomas Sandmann ▴ 90

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bioconductor amazon ami cloud

updated 8.4 years ago by shepherl 4.1k • written 8.4 years ago by kdkorthauer • 0

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BiocParallel amazon

9.3 years ago nitesh.turaga ▴ 140

5 results • Page 1 of 1

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Comment: fail to use addPerROIQC in Rmd by joseph.joonsang • 0

Yes, I did. Here is my code. data.path <- "~/GeoMx_best_practice/data/" filepath <- paste(data.path, "Joon_QC_NPC_4_…

Comment: fail to use addPerROIQC in Rmd by shepherl 4.1k

Just covering all bases. You defined spe earlier in the R markdown that is not shown?

Comment: Open Sesame: in what genes are my differentially methylated probes!! by alyssa-daniel • 0

@zhouwanding I have a question regarding DML analysis. I understand the Est_ output is describing the difference in methylation between the…

Comment: DESeq2 dispersion estimates fitting drastically different based on explanatory v by Sam • 0

Here is the explanatory variables![enter image description here][1] uses if that helps address the problem as well [1]: /media/images/…

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

Thanks, @gabrielhoffman My understanding is that both options would still be mixed models: Even with technical replicates (3 wells per d…

Votes

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

Transcript-level differential expression using DESeq2

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

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Popular Question to joseph.joonsang • 0

Popular Question to Hans-Ulrich Klein ▴ 330