Bioconductor Bplapply

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bioconductor bplapply bpiterate iterator BiocParallel

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by gabriel.hoffman ▴ 160

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bplapply progressbar

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by wt215 • 0

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biocparallel bplapply

updated 6.6 years ago by Martin Morgan 25k • written 6.6 years ago by ioannis.vardaxis ▴ 30

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2.0k

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biocparallel bplapply Suse error process

updated 7.9 years ago by jan.winter • 0 • written 7.9 years ago by schweringmarc01 • 0

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1.4k

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bplapply multicoreParam mac os x

8.1 years ago • updated 8.0 years ago gmerino ▴ 20

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1.3k

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biocparallel bplapply multicore

updated 8.3 years ago by Martin Morgan 25k • written 8.3 years ago by Aaron Lun ★ 28k

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3.1k

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summarizeoverlaps rnaseq bplapply rangedsummarizedexperiment read counting

8.4 years ago ErickF ▴ 40

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5.8k

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bplapply

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by benjamin.phillips22 ▴ 10

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bplapply biocparallel deseq2

updated 9.3 years ago by Valerie Obenchain ★ 6.8k • written 9.3 years ago by Lauren ▴ 40

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1.3k

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biocparallel bplapply

9.5 years ago akaever ▴ 30

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Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

Can this please be revisited and corrected ASAP? I'm encountering the same issue, using a slightly more modern version of R (4.1.0). It s…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Thank you!

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0

Hi Gordon, Thanks for the answer! This makes a lot of sense. Your suggested pipeline (separate processing of datasets -> gene set analyses…

Votes

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

A: p.adjust BH generates duplicate values

Answer: Adjusted p-values become NA when sub-setting samples

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Popular Question to Guido Hooiveld ★ 4.1k