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A way to find which genome builds a package supports
build
genome
23 months ago • updated 22 months ago
Dmitry
• 0
0
votes
1
reply
874
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Error in the Multiple platform build/check report for BioC 3.15
build
BuildReport
updated 3.1 years ago by
Mike Smith
★ 6.6k • written 3.1 years ago by
Meriem
• 0
1
vote
1
reply
581
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Mac/Windows test build systems?
build
updated 3.3 years ago by
shepherl
4.1k • written 3.3 years ago by
hstern2
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0
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1.1k
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News:
Release Deadline: Passing R CMD build and R CMD check
package
build
build/check error
check
release
News
6.8 years ago
shepherl
4.1k
1
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3
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1.7k
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How to access error log from build report
build
testthat
cmd check
updated 9.2 years ago by
James W. MacDonald
67k • written 9.2 years ago by
Peter
• 0
2
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3
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1.4k
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Building a reduced BSgenome.Gallus.UCSC.galGal 4 from Bioconductor
r
build
genome
chicken-sheme
9.3 years ago
pertille
• 0
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Answer: Find exact GRanges match keeping metadata columns
by
Michael Love
43k
You could use `minoverlap` but that requires an integer, not a fraction: ``` gr1 |> join_overlap_left(gr2, minoverlap=6) ``` Plyranges do…
Comment: Unused arguments error without used arguments in GSVA?
by
1sunmic2
• 0
It was due to the comma. Thank you!
Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.1k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
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Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
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