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chromatin
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1
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2.1k
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extract HiC contacts for a given BEDPE set of coordinates
hic
diffhic
chromatin
bedpe
updated 7.4 years ago by
Aaron Lun
★ 29k • written 7.4 years ago by
gryderart
• 0
0
votes
0
replies
1.6k
views
Job:
Postdoctoral position - Molecular Biologist
epigenomics
RNA methylation
RNA dynamics
chromatin
computational biology
Job
8.0 years ago
mattia pelizzola
▴ 200
1
vote
4
replies
2.8k
views
DiffBind error with dba.count after update
diffbind
read counting
warning message
chromatin
atac-seq
updated 8.1 years ago by
Gord Brown
▴ 670 • written 8.2 years ago by
tgjohnst
• 0
5
votes
7
replies
5.7k
views
Differential binding of ATAC-seq data with no replicates
ATAC
differential binding analysis
no replicates
DEseq2
chromatin
8.8 years ago
BioinfGuru
▴ 70
0
votes
0
replies
2.2k
views
Job:
Harvard Medical School: Postdoctoral Research Associate position
Genomic Assays
Chromatin
Computational Biology
Job
11.2 years ago
Doe, Aimee
▴ 40
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Answer: How to do differential expresion across time serise with edgeR?
by
Gordon Smyth
53k
You actually haven't done any DE analysis at all, you've just selected for genes with either zero or large D0 counts. Another issue is tha…
Answer: ATACseq rudimentary questions
by
Kevin Blighe
★ 4.0k
For differential analysis tools like DiffTF and TOBIAS, the standard and statistically sound approach is to create **one large consensus pe…
Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?
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Gordon Smyth
53k
The warning message is telling you that you already have the packages installed. However, you might consider upgrading to the current vers…
Comment: Empty boxes in treemap plot rrvgo package
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TikTsokaasocissalpc
• 0
Clear visualization matters just as much in mobile entertainment as in data analysis. The [Try KK33 Game App now][1] focuses on clean layou…
Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
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Answer: How to install packages such as TCGAbiolinks, SumarizedExperiment?
A: limma-voom duplicateCorrelation once or twice, difference?
A: limma: comparison of repeat measurements - blocking or within-subject correlatio
Answer: DecideTest vs topTAGs in edgeR
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