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circRNA
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507
views
visualization of circRNA
circRNA
circRNAprofiler
2.8 years ago
Bogdan
▴ 670
0
votes
0
replies
784
views
circRNAprofiler - miRNA binding sites
circRNA
RNA-seq
circRNAprofiler
3.6 years ago
Terra
• 0
0
votes
7
replies
1.2k
views
DESEQ2 for circRNA normalisation
DESEQ2
circRNA
normalisation
updated 4.4 years ago by
Michael Love
42k • written 4.4 years ago by
zoe.ward
• 0
1
vote
1
reply
840
views
DESeq2 Analysis of RNA-Edited Reads and Circular RNA
deseq2
circRNA
rna-editing
updated 4.5 years ago by
Michael Love
42k • written 4.5 years ago by
maxhenryhills
• 0
0
votes
4
replies
1.1k
views
Is circular RNA read out as linear fragments during Rsubread-DESeq2
deseq2
circrna
rsubread
updated 5.9 years ago by
Wei Shi
★ 3.6k • written 5.9 years ago by
csijst
• 0
2
votes
5
replies
1.7k
views
DESeq2 on CIRI results ?
deseq2
circrna
ciri
ciri2
6.0 years ago
sbcn
▴ 80
6 results • Page
1 of 1
Recent ...
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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