Bioconductor CytofWorkflow

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FlowSOM cytofWorkflow

updated 13 months ago by helucro ▴ 70 • written 13 months ago by Anirban • 0

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grou heatmaps CyTOFpower cytofWorkflow

14 months ago shuangshuang • 0

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cytofWorkflow

updated 14 months ago by helucro ▴ 70 • written 14 months ago by shuangshuang • 0

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cytofWorkflow cytof diffcyt

3.3 years ago achaillon • 0

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cytofWorkflow

3.3 years ago achaillon • 0

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cytofWorkflow cytofworkflow flowCore

3.4 years ago GFM ▴ 20

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cytofWorkflow diffcyt

3.5 years ago GFM ▴ 20

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CATALYST cytofWorkflow

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by Brent.OCarrigan • 0

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cytofworkflow

4.5 years ago jianjunchencn • 0

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cytofWorkflow

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by o.hunewald • 0

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Comment: Help with error using camera() in limma by Chris • 0

Thanks James! I fixed the error. I try gene symbol instead of entrez and it worked.

Comment: limma for gene expression analysis with big and unbalanced sample size by XW • 0

Could you explain more about the comment "there are no problems with using limma for unbalanced data sets" ? thanks.

Comment: Limma, eBayes different sample size of groups and adjustment by XW • 0

Could you explain more about how the analysis self-correct the different sample sizes when calling DEGs in limma? Thanks

Answer: How do I select a GC file (gc.wig)? (How to determine the inputdata of HMMcopy) by James W. MacDonald 65k

The section of the vignette that is *directly above the one you quote* says that you can use the HMMcopy utils to do all three things. And …

Comment: Help with error using camera() in limma by James W. MacDonald 65k

Again, this is where you need to read the help page and try to diagnose. It says ``` index: an index vector or a list of index vectors. …

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Make custom Txdb class objects from Txdb

Comment: Help with error using camera() in limma

Answer: Help with error using camera() in limma

Comment: Why p value inconsistent when using different number of pathway score?

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