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CATALYST
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194
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Catalyst::cluster function does NOT produce the same results when setting seed
visua
Visualization
CATALYST
3 months ago
elefth.pavlos
▴ 40
0
votes
2
replies
576
views
Invalid spillover matrix with values greater than 1
CATALYST
updated 8 months ago by
SamGG
▴ 330 • written 19 months ago by
David
• 0
2
votes
3
replies
2.0k
views
Keep getting this error "Warning: unable to access index for repository"?
CATALYST
updated 10 months ago by
Hervé Pagès
16k • written 10 months ago by
Hyoann
▴ 20
0
votes
0
replies
374
views
data truncation with sce2fcs()
CATALYST
12 months ago
Shaun
• 0
2
votes
2
replies
1.0k
views
Unable to download CATALYST
CATALYST
20 months ago
David
• 0
1
vote
3
replies
984
views
singlecellexperiments markers after clustering
CATALYST
SingleCellExperiment
updated 3.3 years ago by
helucro
▴ 70 • written 3.3 years ago by
achaillon
• 0
2
votes
2
replies
1.3k
views
Updating package CATALYST
CATALYST
cytofWorkflow
updated 4.3 years ago by
Martin Morgan
25k • written 4.3 years ago by
Brent.OCarrigan
• 0
0
votes
1
reply
939
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
5.1 years ago
j.krop
• 0
8 results • Page
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Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
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