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cytoml
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FCS3.2 reading
flowWorkspace
flowCore
CytoML
updated 25 days ago by
SamGG
▴ 350 • written 8 weeks ago by
jarod
▴ 30
0
votes
0
replies
495
views
CytoML: gatingset_to_flowjo() "Could not find files for the given pattern(s)" error
CytoML
21 months ago
nmchavez
• 0
0
votes
0
replies
532
views
flowjo_to_gatingset() subset samples issue
CytoML
24 months ago
stephenfchristy
• 0
0
votes
0
replies
857
views
[CytoML/ggcyto] y-axis density plot: low cell count numbers
CytoML
ggcyto
cytoml
2.1 years ago
FL
• 0
0
votes
0
replies
647
views
flowjo_to_gatingset function error
CytoML
3.3 years ago
Iman
• 0
0
votes
2
replies
950
views
Add ticks to scale_x_flowjo_biexp()?
R
CytoML
ggycto
updated 3.4 years ago by
Jiang, Mike
★ 1.3k • written 3.4 years ago by
Marissa
• 0
0
votes
2
replies
791
views
cytobank_to_gatingset path too long Error
CytoML
cytobank_to_gatingset
3.7 years ago
km_sch2002
• 0
7 results • Page
1 of 1
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Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
by
Robert Castelo
★ 3.2k
Hi, your `c2` object storing all the gene sets is probably a `list` object, where element names are the names of the pathways given by MSig…
Comment: Differential peaks that were not identified in diffbind were identified in diseq
by
lonn
• 0
I tried the default normalization and got similar results as above. Perhaps I need to try identifying the difference peak without using dif…
Answer: Cannabis and KEGGgraph
by
deeenes
▴ 30
Hello, I'm a developer of the `OmnipathR` package, and I wrote [a function][1] to access certain KEGG data: library(OmnipathR) cs…
Answer: RNAseq:Technical replicates from different batches
by
Gordon Smyth
50k
I am not entirely clear what you mean by "technical" replicates in this case. Are they resequencing of the same RNA samples or are they fre…
Comment: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
by
russ.bainer
▴ 10
Hi, I'm hitting this too. As far as I can tell my DataTrack is fine, but perhaps I am missing something. Notably the same code works on o…
Votes
Installing/switching between versions of R/Rstudio/Bioconductor on personal machine (Linux | Ubuntu)
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
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shepherl
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Gordon Smyth
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