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Are equal whisker lengths important in an RLE plot?
EDASeq EDA
18 months ago BioinfGuru ▴ 70
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4
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1.3k
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EDAseq to normalise for both gene-length and GC-content
norma EDASeq EDA Normalization
23 months ago samuel.channon • 0
2
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4
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2.6k
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Comparing discrete variable to PCA
EDA pcaExplorer PCAtools PCA
updated 4.2 years ago by ▴ 20 • written 5.5 years ago by ▴ 120
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5
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2.6k
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Paired design, normalisation and batch effects.
deseq2 eda sva rna-seq
updated 9.5 years ago by ▴ 610 • written 9.5 years ago by ▴ 10
4 results • Page 1 of 1
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Answer: Bulk RNAseq analysis for by Gordon Smyth 53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0
By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…
Answer: Bulk RNAseq analysis for by James W. MacDonald 68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
Comment: Jobs at Ensembl by frostybuddyy • 0
I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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