Showing : enmix • reset
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preprocessENmix colnames Error
ENmix Preprocessing
14 months ago • updated 13 months ago Eve • 0
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2
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693
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How to get the DMR?
ENmix
15 months ago Alex • 0
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6
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1.5k
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Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix Bioconductor
updated 16 months ago by • 0 • written 16 months ago by ▴ 10
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18
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3.8k
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problem installing ENmix package
ENmix Bioconductor rtracklayer
written 4.6 years ago by • 0
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2
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1.4k
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Help with ENmix readidat
ENmix IlluminaHumanMethylationEPICmanifest
updated 16 months ago by 68k • written 3.4 years ago by • 0
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can ENmix::oxBS.MLE be run on comBat-adjusted data?
ENmix comBat
4.5 years ago joannew • 0
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ENmix: how to combine oxBS.MLE with RCP?
ENmix
4.6 years ago joannew • 0
0
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1
reply
1.3k
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could not find function "ComBat.mc"
ENmix
updated 4.9 years ago by 4.2k • written 4.9 years ago by ▴ 20
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852
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Error in peak calling with Combp
ENmix
4.9 years ago mwjnorris ▴ 10
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933
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Error for ENmix::bmiq.mc() on one sample
ENmix
6.6 years ago moldach ▴ 20
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1.5k
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Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation ENmix BMIQ wateRmelon
6.6 years ago moldach ▴ 20
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1.3k
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how to install ENmix github master branch on Ubuntu machine?
ENmix
written 9.1 years ago by ▴ 10
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4
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2.5k
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ComBat: Adjustment for 3experimental variables
ENmix combat.mc illumina450k combat sva
9.2 years ago DSP • 0
13 results • Page 1 of 1
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Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k
107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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