Showing : enmix • reset
0
votes
5
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1.1k
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preprocessENmix colnames Error
ENmix Preprocessing
15 months ago Eve • 0
1
vote
2
replies
747
views
How to get the DMR?
ENmix
16 months ago Alex • 0
0
votes
6
replies
1.6k
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix Bioconductor
updated 17 months ago by • 0 • written 17 months ago by ▴ 10
0
votes
18
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3.9k
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problem installing ENmix package
ENmix Bioconductor rtracklayer
written 4.7 years ago by • 0
0
votes
2
replies
1.5k
views
Help with ENmix readidat
ENmix IlluminaHumanMethylationEPICmanifest
updated 17 months ago by 68k • written 3.5 years ago by • 0
0
votes
0
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1.1k
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can ENmix::oxBS.MLE be run on comBat-adjusted data?
ENmix comBat
4.6 years ago joannew • 0
0
votes
0
replies
870
views
ENmix: how to combine oxBS.MLE with RCP?
ENmix
4.7 years ago joannew • 0
0
votes
1
reply
1.3k
views
could not find function "ComBat.mc"
ENmix
updated 5.0 years ago by 4.2k • written 5.0 years ago by ▴ 20
1
vote
0
replies
873
views
Error in peak calling with Combp
ENmix
5.0 years ago mwjnorris ▴ 10
0
votes
0
replies
950
views
Error for ENmix::bmiq.mc() on one sample
ENmix
6.7 years ago moldach ▴ 20
0
votes
0
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1.6k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation ENmix BMIQ wateRmelon
6.7 years ago moldach ▴ 20
1
vote
2
replies
1.4k
views
how to install ENmix github master branch on Ubuntu machine?
ENmix
written 9.2 years ago by ▴ 10
0
votes
4
replies
2.6k
views
ComBat: Adjustment for 3experimental variables
ENmix combat.mc illumina450k combat sva
9.4 years ago DSP • 0
13 results • Page 1 of 1
Recent ...
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Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction by Kevin Blighe ★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Votes
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
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