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enmix
•
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0
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5
replies
1.1k
views
preprocessENmix colnames Error
ENmix
Preprocessing
14 months ago
Eve
• 0
1
vote
2
replies
703
views
How to get the DMR?
ENmix
15 months ago
Alex
• 0
0
votes
6
replies
1.6k
views
Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix
Bioconductor
updated 16 months ago by
kred
• 0 • written 17 months ago by
minardsmitha
▴ 10
0
votes
18
replies
3.8k
views
problem installing ENmix package
ENmix
Bioconductor
rtracklayer
written 4.6 years ago by
lea
• 0
0
votes
2
replies
1.4k
views
Help with ENmix readidat
ENmix
IlluminaHumanMethylationEPICmanifest
updated 17 months ago by
James W. MacDonald
68k • written 3.4 years ago by
Daphna
• 0
0
votes
0
replies
1.0k
views
can ENmix::oxBS.MLE be run on comBat-adjusted data?
ENmix
comBat
4.6 years ago
joannew
• 0
0
votes
0
replies
855
views
ENmix: how to combine oxBS.MLE with RCP?
ENmix
4.6 years ago
joannew
• 0
0
votes
1
reply
1.3k
views
could not find function "ComBat.mc"
ENmix
updated 4.9 years ago by
shepherl
4.2k • written 4.9 years ago by
ycding
▴ 20
1
vote
0
replies
864
views
Error in peak calling with Combp
ENmix
5.0 years ago
mwjnorris
▴ 10
0
votes
0
replies
943
views
Error for ENmix::bmiq.mc() on one sample
ENmix
6.6 years ago
moldach
▴ 20
0
votes
0
replies
1.6k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation
ENmix
BMIQ
wateRmelon
6.7 years ago • updated 6.6 years ago
moldach
▴ 20
1
vote
2
replies
1.3k
views
how to install ENmix github master branch on Ubuntu machine?
ENmix
written 9.2 years ago by
avilella
▴ 10
0
votes
4
replies
2.5k
views
ComBat: Adjustment for 3experimental variables
ENmix
combat.mc
illumina450k
combat sva
9.3 years ago
DSP
• 0
13 results • Page
1 of 1
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Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
dzv20413
• 0
Wow, GBCC 2025 sounds amazing, can not wait to see the logo contest results! Also, I just played [Level Devil][1] and it is super addictive…
Comment: Memory error while running alignments
by
Erik Wright
▴ 150
How much memory is available on the computer? A distance matrix of 50k sequences requires at least 50k*50k/2 * 8 bytes = 10GB, assuming the…
Comment: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
Gabriel
• 0
Thank you very much for the reply. However, none of these three options seems to fit: 1) The genes for which NA appears do not have all 0 …
Comment: "organism" missing in BSgenome.Hsapiens.UCSC.hg38 slotNames
by
ubjw24
• 0
Thank you for your replies. I got the problem solved by installing mutSignature with this line: ``` devtools::install_github("dami82/mutS…
Comment: DESeq2 design for haplotype MPRA
by
Rita
• 0
Thank you very much, I appreciate it!
Votes
Comment: Check removeBatchEffect effectiveness
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
Answer: DESeq2 design for haplotype MPRA
A: Different logFC (log2foldchange) values for genes from limma-voom and other too
Comment: Check removeBatchEffect effectiveness
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