Bioconductor ENmix

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1.7k

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ENmix Bioconductor rtracklayer

updated 23 days ago by Jenifer • 0 • written 2.6 years ago by lea • 0

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430

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ENmix IlluminaHumanMethylationEPICmanifest

updated 16 months ago by shepherl 3.5k • written 16 months ago by Daphna • 0

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510

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ENmix comBat

2.5 years ago joannew • 0

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418

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ENmix

2.6 years ago joannew • 0

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633

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ENmix

updated 2.9 years ago by shepherl 3.5k • written 2.9 years ago by ycding ▴ 10

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468

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ENmix

2.9 years ago mwjnorris ▴ 10

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504

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ENmix

4.6 years ago moldach ▴ 20

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895

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methylation ENmix BMIQ wateRmelon

4.6 years ago moldach ▴ 20

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766

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ENmix

updated 7.1 years ago by Martin Morgan 25k • written 7.1 years ago by avilella ▴ 10

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1.5k

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ENmix combat.mc illumina450k combat sva

7.2 years ago DSP • 0

10 results • Page 1 of 1

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Comment: LIMMA dupcor() function time issue. by Gordon Smyth 48k

That's ok, but there is nothing to be gained by subsetting 1000 times. It would be better to simply subset 100,000 rows once, although the …

Comment: Specifying evidence channels in STRINGdb by robynne.braun • 0

Also I found prior thread here addressing the same question with response that functionality will be supported someday. This was a few year…

Comment: Problems with FLOWAI by SHASHI • 0

please try this using short path name and keeping your fcs file and wsp file in your local directory https://youtu.be/xLeqE7PNYzA

Comment: DataFrame Construction With Non-standard Column by Hervé Pagès 16k

SimpleList is a List derivative and List derivatives in general don't need protection. For example, a GRangesList object (which is also a L…

Answer: Deseq2, how to model design for comparing Mutant mouse at age 14 days versus Mu by swbarnes2 ★ 1.3k

The Status grouping you show above is good to use if you want to simply compare one subset of samples to another subset. The ~Genotype +…

Votes

Answer: Deseq2, enrichGO and ensembl ID

A: LIMMA dupcor() function time issue.

Answer: Further analysis after limma regression output

A: collapseReplicates in DESeq2

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