Showing : wateRmelon • reset
0
votes
0
replies
1.1k
views
A survey of computational setups for Illumina Infinium DNA methylation EPIC array pipeline
DNAMethylation wateRmelon Computation minfi
3.5 years ago calen.p.ryan • 0
0
votes
7
replies
1.8k
views
Getting wrong rownames of MSet object when using pfilter from watermelon
wateRmelon Illumina EPIC pfilter
updated 6.2 years ago by • 0 • written 6.2 years ago by • 0
1
vote
3
replies
2.2k
views
Combining pfilter (wateRmelon) and preprocessNoob (minfi)
wateRmelon minfi methylation pfilter preprocessNoob
updated 6.4 years ago by ▴ 10 • written 6.5 years ago by • 0
0
votes
0
replies
1.7k
views
Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
methylation ENmix BMIQ wateRmelon
7.0 years ago moldach ▴ 20
0
votes
1
reply
2.1k
views
MethylSet to MethyLumiSet
minfi methylumi watermelon
9.0 years ago Tom ▴ 10
0
votes
5
replies
3.1k
views
Different errors when attempting to normalize using wateRmelon (v1.1.18)
wateRmelon methylation EPIC normalization
9.1 years ago Wade Davis ▴ 60
0
votes
2
replies
2.1k
views
Error while using BMIQ normalisation on a methylumiSet
limma watermelon methylumi bmiq
updated 9.2 years ago by ▴ 10 • written 9.2 years ago by ▴ 10
1
vote
2
replies
2.5k
views
QC/normalization standards for cancer studies with 450k array data
minfi watermelon cancer 450k normalization
updated 10.6 years ago by ★ 6.5k • written 10.6 years ago by ▴ 10
0
votes
3
replies
2.7k
views
minfi getProbeInfo error ( was WateRmelon betaqn error)
watermelon betaqn pfilter getProbeInfo minfi
11.0 years ago gctromp ▴ 10
0
votes
10
replies
3.1k
views
MethyLumiM to MethyLumiSet?
convert lumi methylumi minfi wateRmelon convert lumi methylumi minfi wateRmelon
updated 12.3 years ago by ★ 4.2k • written 12.3 years ago by ▴ 190
10 results • Page 1 of 1
Recent ...
Replies
Comment: GOseq Probability Weight Function bad fit by a2sahaaaq2c • 0
the mobile gaming world offers a different kind of strategic challenge. Many users today are shifting from heavy data processing to lighthe…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
Comment: DiffBind plot.profile error by a2sahaaaq2c • 0
To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Awards • All
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to shepherl 4.3k
Popular Question to Steve Lianoglou ★ 13k
Teacher to Michael Love 43k
Supporter to fl ▴ 20
Locations • All
Pakistan, 6 minutes ago
WEHI, Melbourne, Australia, 26 minutes ago
The city by the bay, 34 minutes ago
Poland, 2 hours ago
United States, 3 hours ago
Traffic: 994 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6