Bioconductor Ensdb

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 15 months ago by shepherl 4.2k • written 3.8 years ago by jon.klonowski ▴ 40

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EnsDb ensembldb annotation AnnotationHub News

5.2 years ago Johannes Rainer ★ 2.1k

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annotation ensembldb EnsDb AnnotationHub News

5.9 years ago Johannes Rainer ★ 2.1k

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GRanges ChIPseeker annotatePeak TxDb EnsDb

updated 6.7 years ago by Johannes Rainer ★ 2.1k • written 6.7 years ago by foehn ▴ 100

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Answer: Important: Bioconductor Release 3.22 Delayed by shepherl 4.2k

We will continue with the release on Thursday October 30th. We have shifted one day as originally planned. Thank you

Comment: bake() and cool() resulting in an empty table by Francesc • 0

Hi Catherine, thanks so much for using dar and for reporting this bug! We have identified the issue and pushed a fix to the dar repo (PR #…

Comment: Using DESeq2 for age prediction by ATpoint ★ 5.0k

You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…

Comment: Using DESeq2 for age prediction by picasa1983 • 0

Thanks ! Do you have any idea how to do that ?

Answer: Using DESeq2 for age prediction by ATpoint ★ 5.0k

The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…

Votes

A: Multi-level experiments in Limma

Answer: Should voomWithQualityWeights still be used when the sample-specific weights var

Answer: DESeq2 for candidate gene analysis

DESeq2 for candidate gene analysis

Answer: DESeq2 for candidate gene analysis

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