Bioconductor ExomeCopy

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535

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exomeCopy

updated 23 months ago by Michael Love 41k • written 23 months ago by joel.wallenius • 0

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636

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exomeCopy

updated 23 months ago by Michael Love 41k • written 23 months ago by ef.kafantari • 0

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569

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exomeCopy CNV WES

3.1 years ago Cheng • 0

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692

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exomeCopy

updated 4.8 years ago by Michael Love 41k • written 4.8 years ago by kkyung412 • 0

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774

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exomecopy

updated 6.2 years ago by Michael Love 41k • written 6.2 years ago by chiara.rigobello • 0

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1.0k

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exomecopy cnv

6.3 years ago ramakrishnas • 0

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975

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exomecopy

updated 6.5 years ago by Michael Love 41k • written 6.5 years ago by sruddy17 • 0

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1.2k

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cnv exomecopy

updated 8.4 years ago by Michael Love 41k • written 8.4 years ago by cafelumiere12 ▴ 20

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1.3k

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exomecopy exon array analysis CODEX

9.0 years ago kaushal Raj Chaudhary ▴ 10

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1.5k

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exomeCopy exomeCopy

updated 11.0 years ago by Michael Love 41k • written 11.0 years ago by Kevin Lee ▴ 40

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925

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exomeCopy exomeCopy

updated 11.0 years ago by Michael Love 41k • written 11.0 years ago by Guru Ananda ▴ 10

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910

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Sequencing exomeCopy Sequencing exomeCopy

11.4 years ago love ▴ 150

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1.1k

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Sequencing exomeCopy Sequencing exomeCopy

11.4 years ago Guest User ★ 13k

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2.4k

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exomeCopy exomeCopy

updated 11.6 years ago by love ▴ 150 • written 11.6 years ago by Lescai, Francesco ▴ 380

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2.6k

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IRanges exomeCopy IRanges exomeCopy

updated 11.7 years ago by love ▴ 150 • written 11.7 years ago by Lescai, Francesco ▴ 380

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1.1k

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exomeCopy exomeCopy

updated 11.8 years ago by Martin Morgan 25k • written 11.8 years ago by Lescai, Francesco ▴ 380

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1.3k

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exomeCopy exomeCopy

updated 12.0 years ago by love ▴ 150 • written 12.0 years ago by Dan Spiegelman ▴ 10

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860

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exomeCopy exomeCopy

12.1 years ago love ▴ 150

18 results • Page 1 of 1

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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Votes

Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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