Bioconductor Exon array analysis

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629

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pd.huex.1.0.st.v2 exon array analysis

updated 4.6 years ago by James W. MacDonald 63k • written 4.6 years ago by GENOMIC_region • 0

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691

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exons exon array analysis

updated 4.6 years ago by James W. MacDonald 63k • written 4.6 years ago by GENOMIC_region • 0

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1.1k

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differential exon usage exon array analysis annotation hta2.0 diffsplice

updated 5.7 years ago by James W. MacDonald 63k • written 5.7 years ago by relathman ▴ 20

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1.3k

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onechannelgui exon array analysis R

7.6 years ago anna.dolnik • 0

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2.5k

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oligo exon array analysis

updated 8.0 years ago by Marc Carlson ★ 7.2k • written 8.0 years ago by Elena Serrano ▴ 30

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998

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exomecopy exon array analysis CODEX

8.1 years ago kaushal Raj Chaudhary ▴ 10

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3.1k

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affymetrixchip GenechipHumanTranscriptomeArray2.0 exon array analysis

8.2 years ago svlachavas ▴ 810

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4.8k

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exonmap exon array analysis bioconductor

8.3 years ago svlachavas ▴ 810

8 results • Page 1 of 1

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Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

Sure, noted.

Comment: Question on constructing design matrix and defining contrasts for analysis by mohammedtoufiq91 ▴ 10

@gordonsmyth Yes, I realized while re-running through the WGCNA workflow and forget to account for the paired experiment. For general gene …

Comment: Question on constructing design matrix and defining contrasts for analysis by Gordon Smyth 47k

PS. Just as aside, using `dput` to show a data.frame is unnecessary overkill. Just typing `targetsframe` at the prompt would do the job.

Comment: Question on constructing design matrix and defining contrasts for analysis by Gordon Smyth 47k

> Basically, I want to create a design matrix and binarize by 0 and 1 to be used in WGCNA analysis to compare module between/within groups …

Comment: SummarizedExperiment is now warning on attach about `read_block` namespace confl by ansleyharralson • 0

Any estimate on when DelayedArray 0.26.3 will be released for macOS Binary (arm64)? Latest is still 0.26.02 best I can tell.

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WGCNA coupled with differential expression analysis: question about baseline module detection

WGCNA with paired samples

Comment: Question on constructing design matrix and defining contrasts for analysis

Answer: Question on constructing design matrix and defining contrasts for analysis

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Teacher to James W. MacDonald 63k