Bioconductor FlowDensity

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flowDensity

21 months ago fredrikwallberg • 0

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843

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flowDensity flowCore

2.0 years ago info ▴ 10

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1.2k

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flowCore flowDensity

3.8 years ago nmchavez • 0

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flowdensity flowcore for loop

updated 7.0 years ago by Bioconductor Community 0 • written 7.2 years ago by beshea.jj • 0

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flowcore flow cytometry flowdensity hyperlog transformation

updated 7.4 years ago by Jiang, Mike ★ 1.3k • written 7.4 years ago by Joseph.Hanson • 0

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flowDensity developers

updated 8.5 years ago by Martin Morgan 25k • written 8.5 years ago by mmalek • 0

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flowdensity flowviz

updated 9.9 years ago by Jiang, Mike ★ 1.3k • written 9.9 years ago by Ulrik Stervbo ▴ 30

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flowdensity

11.3 years ago rschmidt2 • 0

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flowClust openCyto flowDensity flowClust openCyto flowDensity

11.4 years ago Jiang, Mike ★ 1.3k

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flowClean flowDensity flowClean flowDensity

updated 11.6 years ago by Justin Meskas ▴ 60 • written 11.6 years ago by Kipper Fletez-Brant ▴ 150

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flowDensity flowDensity

updated 11.8 years ago by Josef Spidlen ▴ 140 • written 11.8 years ago by Raghu ▴ 20

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1.3k

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openCyto flowDensity openCyto flowDensity

11.8 years ago Jiang, Mike ★ 1.3k

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Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0

Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …

Answer: limpa analysis advice by Gordon Smyth 53k

It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…

Answer: When to use edgeR or limma by Gordon Smyth 53k

The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k

I updated the above answer today.

Answer: When to use edgeR or limma by James W. MacDonald 68k

I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…

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Answer: When to use edgeR or limma

A: deseq2 - paired samples in 2 sequencing types with very different library sizes

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Popular Question to Lluís Revilla Sancho ▴ 760