Bioconductor Genelendatabase

Showing : genelendatabase • reset

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647

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geneLenDataBase ChAMP

updated 7 months ago by shepherl 4.1k • written 7 months ago by Fang • 0

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646

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geneLenDataBase

updated 2.9 years ago by Kevin Blighe ★ 4.0k • written 2.9 years ago by Prerna • 0

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2.0k

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genelendatabase goseq

updated 9.1 years ago by Nadia Davidson ▴ 320 • written 9.1 years ago by Mehmet Ilyas Cosacak • 0

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3.5k

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goseq geneLenDataBase bioclite rstudio

updated 9.4 years ago by Martin Morgan 25k • written 9.4 years ago by amyfm ▴ 10

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1.5k

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goseq genelendatabase

9.6 years ago FeiYian Yoong ▴ 30

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2.3k

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geneLenDataBase mm10

updated 10.1 years ago by Hervé Pagès 16k • written 10.1 years ago by Robert K. Bradley ▴ 40

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Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k

If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …

Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

Votes

Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

A: Is logFC a log2 fold change or some other base in scran::findMarkers

Comment: Error in retrieving clinical data

What is the cheapest day to fly on American Airlines? {Ask_Expert}

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