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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.4 years ago rgentleman ★ 5.5k
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problems with getBioC() and getBioC(develOK=TRUE) on R 2.0.0
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.4 years ago Goeman, J.J. MSTAT ▴ 150
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Errors w/ getBioC(develOK =TRUE) with R2.0 devel
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.5 years ago • updated 21.4 years ago Matthew Hannah ▴ 940
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Errors w/ getBioC()
aCGH GO Biobase DynDoc annotate edd genefilter geneplotter rhdf5 multtest ctc ROC affy
21.5 years ago Matthew Hannah ▴ 940
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Plotting together data from hgu133a and b
hgu133a hgu133b geneplotter hgu133a hgu133b geneplotter
updated 21.6 years ago by ★ 5.5k • written 21.6 years ago by ▴ 500
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geneplotter and base position
Annotation geneplotter affy Annotation geneplotter affy
21.7 years ago david neil hayes ▴ 70
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Suggestion to geneplotter vignette
Annotation geneplotter Annotation geneplotter
21.9 years ago Palle Villesen ▴ 10
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Help using annotation data without explicitly building data package
Annotation geneplotter Annotation geneplotter
updated 22.3 years ago by 6.7k • written 22.3 years ago by 21k
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Problems accessing the Milan package through the vignettes Explorer
Cancer Biobase annotate edd geneplotter multtest tkWidgets affydata vsn graph hexbin
updated 22.7 years ago by ★ 2.9k • written 22.7 years ago by ▴ 130
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using geneplotter with my own data
geneplotter geneplotter
updated 22.7 years ago by ★ 3.9k • written 22.7 years ago by ▴ 80
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[bioC] GenePlotter for mgu74v2
GO Cancer mgu74a mgu74av2 geneplotter GO Cancer mgu74a mgu74av2 geneplotter
updated 22.8 years ago by ★ 5.5k • written 22.8 years ago by ★ 2.9k
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getBioC v1.2.22 & [R] v1.6.2
annotate edd genefilter geneplotter rhdf5 multtest ROC tkWidgets reposTools affy vsn
updated 22.9 years ago by ★ 3.9k • written 22.9 years ago by ▴ 70
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contributing to Bioconductor
GO Clustering geneplotter GO Clustering geneplotter
22.9 years ago Wilkinson, Mark ▴ 60
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Recent changes to Bioconductor packages
SAGE annotate geneplotter graph SAGElyzer Rdbi SAGE annotate geneplotter graph SAGElyzer
23.0 years ago madman@jimmy.harvard.edu ▴ 850
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Problems with url/download and http_proxy
Biobase annotate edd geneplotter tkWidgets ASSIGN Biobase annotate edd geneplotter
updated 23.7 years ago by ▴ 50 • written 23.7 years ago by ▴ 460
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Re: Bioconductor digest, Vol 1 #41 - 4 msgs
geneplotter multtest geneplotter multtest
23.7 years ago HYing ▴ 20
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Problem with datasets (was: Re: Bioconductor digest, Vol 1 #41 - 4 msgs)
geneplotter multtest geneplotter multtest
23.7 years ago Laurent Gautier ★ 2.3k
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Bioconductor 1.0
Microarray Annotation Normalization Cancer genefilter geneplotter multtest ROC Microarray
23.8 years ago Anthony Rossini ▴ 530
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peer review process/DATE CORRECTION
Biobase annotate edd genefilter geneplotter rhdf5 multtest ROC tkWidgets affy AnnBuilder
23.9 years ago Vincent J. Carey, Jr. 6.7k
69 results • Page 2 of 2
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Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Korneel • 0
Thanks for the quick reply! If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…
Comment: Pathway abundance data from Curatedmetagenomics by yesquokkan • 0
Hello, I was also wondering about the same issue. Did you figure it out?
Comment: [DESeq2] Changing dispersion estimates between runs of DESeq2 by colinmccornack • 0
FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name by Erik Wright ▴ 160
This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…
Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0
For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…
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Answer: Subsetting data verses contrasts [DESeq2]?
A: WGCNA differences two groups 10 replicates each group
A: WGCNA sample size minimum: why?
Comment: Why does IDTaxa trainingSet for SILVA contain "_2" suffixes in the taxonomy name
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