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ggplot
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2
votes
3
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1.1k
views
Plot PCA with ellipses using ggplot
DESeq2
ggplot
PCA
written 3 months ago by
robledoj13
• 0
0
votes
2
replies
998
views
ggplot and geom_lines for clustering
ggplot
updated 19 months ago by
Konstantinos Yeles
▴ 80 • written 20 months ago by
R_diot
• 0
0
votes
0
replies
632
views
Using a clustree object to draw a "classical" dendogram
ggplot
dendogram
ggtreeExtra
clustree
ggtree
20 months ago
christian.dina
• 0
0
votes
0
replies
726
views
TCseq plot
TCseq
ggplot
2.5 years ago
jochen
• 0
0
votes
0
replies
2.2k
views
How to solve Error in ggplot could not find function "+<-"?
ggplot
2.9 years ago
nattzy94
▴ 20
1
vote
1
reply
738
views
problem regarding bioconducter package installation
ggplot
updated 3.6 years ago by
Kevin Blighe
★ 4.0k • written 3.6 years ago by
abhisek001
• 0
0
votes
0
replies
805
views
How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot2
ggplot
cmplot
5.6 years ago
gens8094
• 0
0
votes
0
replies
789
views
How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot
cmplot
ggplot2
5.7 years ago
gens8094
• 0
0
votes
1
reply
22k
views
Error in .External.graphics(C_layout, num.rows, num.cols, mat, as.integer(num.figures)
edger
ggplot
updated 7.1 years ago by
Aaron Lun
★ 28k • written 7.1 years ago by
mictadlo
▴ 10
2
votes
1
reply
2.0k
views
Error in plot.new() : figure margins too large
edger
ggplot
updated 7.1 years ago by
Gordon Smyth
51k • written 7.1 years ago by
mictadlo
▴ 10
1
vote
1
reply
1.7k
views
ggplot same data, different plots
ggplot2
ggplot
plot
updated 8.8 years ago by
James W. MacDonald
67k • written 8.8 years ago by
alptaciroglu
▴ 50
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Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di
by
James W. MacDonald
67k
The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…
Comment: Identical samples after deseq2 batch effect removal
by
Michael Love
42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA
by
Kent
• 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
by
James W. MacDonald
67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Answer: HilBertVis install error
by
James W. MacDonald
67k
It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…
Votes
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
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