Showing : ggplot • reset
2
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3
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Plot PCA with ellipses using ggplot
DESeq2 ggplot PCA
written 16 months ago by • 0
0
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2
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1.4k
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ggplot and geom_lines for clustering
ggplot
updated 2.7 years ago by ▴ 90 • written 2.7 years ago by • 0
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0
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956
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Using a clustree object to draw a "classical" dendogram
ggplot dendogram ggtreeExtra clustree ggtree
2.7 years ago christian.dina • 0
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1.0k
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TCseq plot
TCseq ggplot
3.5 years ago jochen • 0
0
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0
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3.0k
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How to solve Error in ggplot could not find function "+<-"?
ggplot
4.0 years ago nattzy94 ▴ 20
1
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1
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970
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problem regarding bioconducter package installation
ggplot
updated 4.6 years ago by ★ 4.0k • written 4.6 years ago by • 0
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0
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1.0k
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How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot2 ggplot cmplot
6.7 years ago gens8094 • 0
0
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0
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999
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How to plot "chromosomewise" "allele frequency" of a "Hybrid" in comparison to its "Inbred parents"
ggplot cmplot ggplot2
6.7 years ago gens8094 • 0
0
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1
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24k
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Error in .External.graphics(C_layout, num.rows, num.cols, mat, as.integer(num.figures)
edger ggplot
updated 8.2 years ago by ★ 29k • written 8.2 years ago by ▴ 10
2
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1
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2.3k
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Error in plot.new() : figure margins too large
edger ggplot
updated 8.2 years ago by 53k • written 8.2 years ago by ▴ 10
1
vote
1
reply
1.9k
views
ggplot same data, different plots
ggplot2 ggplot plot
updated 9.9 years ago by 68k • written 9.9 years ago by ▴ 50
11 results • Page 1 of 1
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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