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goProfiles
•
reset
0
votes
1
reply
892
views
I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db
GOfuncR
GO
GOSim
goProfiles
updated 2.2 years ago by
Basti
▴ 780 • written 2.2 years ago by
yeluo
• 0
3
votes
9
replies
3.2k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
10.3 years ago
artur
▴ 80
0
votes
0
replies
1.7k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
10.7 years ago
Arnaud Mounier
▴ 40
0
votes
0
replies
1.4k
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
11.4 years ago
Marc Carlson
★ 7.2k
0
votes
0
replies
1.8k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
11.4 years ago
Guest User
★ 13k
0
votes
2
replies
1.2k
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
updated 11.9 years ago by
Marc Carlson
★ 7.2k • written 11.9 years ago by
Jose M Garcia Manteiga
▴ 310
0
votes
2
replies
1.2k
views
Profiles
GO
goProfiles
GO
goProfiles
updated 12.2 years ago by
Steve Lianoglou
★ 13k • written 12.2 years ago by
Guest User
★ 13k
0
votes
2
replies
1.7k
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
updated 14.5 years ago by
Marc Carlson
★ 7.2k • written 14.5 years ago by
Xiaohui Wu
▴ 280
0
votes
1
reply
1.5k
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
updated 14.5 years ago by
James W. MacDonald
67k • written 14.5 years ago by
Xiaohui Wu
▴ 280
0
votes
0
replies
895
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
14.6 years ago
wei tie
▴ 30
0
votes
0
replies
1.2k
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
15.3 years ago
Johannes Hanson
▴ 30
0
votes
0
replies
1.0k
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
15.5 years ago
Jean-Pierre Desvignes
▴ 60
0
votes
8
replies
2.1k
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
updated 15.6 years ago by
Steve Lianoglou
★ 13k • written 15.6 years ago by
Massimo Pinto
▴ 390
0
votes
2
replies
1.3k
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
updated 16.6 years ago by
Alex Sanchez
▴ 20 • written 16.6 years ago by
Straubhaar, Juerg
▴ 300
14 results • Page
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Comment: RnBeads::combine() - error?
by
Urotree
• 0
pheno <- rnb.set.arrays@pheno # Phenotypic data sites <- rnb.set.arrays@sites # CpG site definitions (data.frame) meth <- rnb.set…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
![enter image description here][1] [1]: /media/images/40d9778d-b044-4405-9b3d-2ba835f6 Hi, after I convert to RnBiseqSet, it shows "All…
Comment: RnBeads::combine() - error?
by
Urotree
• 0
rnb.set.biseq <- RnBiseqSet( pheno = pheno, sites = sites, meth = meth, covg = NULL, # This can be NULL if coverage …
Answer: How to increase font for gene name and increase arrow size for GVIZ's ( UcscTra
by
ming
• 0
`fontsize` for title font size, `fontsize.group` for gene symbol font size tx.track <- GeneRegionTrack(hg38.gtf, …
Answer: How do I fix an odd voom plot in a combined dataset?
by
Gordon Smyth
52k
voom is a DE analysis method rather than a normalization method. voom expects the design matrix to be the same complete design matrix that …
Votes
Answer: enrichGOgradient color change
How do I fix an odd voom plot in a combined dataset?
Answer: Warning message when running limma with covariates
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
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