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goSlim
•
reset
0
votes
8
replies
700
views
GOslim missing GO term
GO.db
GOslim
5 months ago
amanda
• 0
3
votes
4
replies
1.5k
views
GSEABase - Map gene/transcript IDs to GOslims?
gseabase
go
gene ontology
goslim
4.2 years ago • updated 13 months ago
samwhite
▴ 20
7
votes
9
replies
3.0k
views
GSEABase - View/extract GO terms mapped to each GOslim
go
GSEABase
GOslim
gene ontology
4.2 years ago • updated 13 months ago
samwhite
▴ 20
0
votes
2
replies
1.6k
views
Resolved- GSEAbase: goSlim function, pb with counts
GSEA
GO
goSlim
6.6 years ago
maeva.mollion
• 0
1
vote
1
reply
1.3k
views
Obtaining Go slim terms from biomaRt
biomaRt
goslim
go
updated 7.5 years ago by
Mike Smith
★ 6.5k • written 7.5 years ago by
rubi
▴ 110
0
votes
0
replies
1.3k
views
Create list of genes within each GOslim term
gene ontology
goslim
enrichment analysis
gene annotation
8.0 years ago
mirko
• 0
6 results • Page
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Answer: SGSeq: moving toward diffex from SGSeq analysis
by
Leonard Goldstein
▴ 200
`vid` and `eid` are unique identifiers for splice variants and splicing events respectively. They are analogous to exon bin and gene identi…
Comment: Help with error using camera() in limma
by
Chris
• 0
Thanks James! I fixed the error. I try gene symbol instead of entrez and it worked.
Comment: limma for gene expression analysis with big and unbalanced sample size
by
XW
• 0
Could you explain more about the comment "there are no problems with using limma for unbalanced data sets" ? thanks.
Comment: Limma, eBayes different sample size of groups and adjustment
by
XW
• 0
Could you explain more about how the analysis self-correct the different sample sizes when calling DEGs in limma? Thanks
Answer: How do I select a GC file (gc.wig)? (How to determine the inputdata of HMMcopy)
by
James W. MacDonald
65k
The section of the vignette that is *directly above the one you quote* says that you can use the HMMcopy utils to do all three things. And …
Votes
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
Comment: Help with error using camera() in limma
Answer: Help with error using camera() in limma
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Leonard Goldstein
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