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GOslim
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reset
0
votes
8
replies
1.5k
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GOslim missing GO term
GO.db
GOslim
17 months ago
amanda
• 0
3
votes
4
replies
2.6k
views
GSEABase - Map gene/transcript IDs to GOslims?
gseabase
go
gene ontology
goslim
5.3 years ago • updated 2.2 years ago
samwhite
▴ 20
7
votes
9
replies
4.7k
views
GSEABase - View/extract GO terms mapped to each GOslim
go
GSEABase
GOslim
gene ontology
5.3 years ago • updated 2.1 years ago
samwhite
▴ 20
0
votes
2
replies
2.0k
views
Resolved- GSEAbase: goSlim function, pb with counts
GSEA
GO
goSlim
7.7 years ago
maeva.mollion
• 0
1
vote
1
reply
1.5k
views
Obtaining Go slim terms from biomaRt
biomaRt
goslim
go
updated 8.5 years ago by
Mike Smith
★ 6.6k • written 8.5 years ago by
rubi
▴ 110
0
votes
0
replies
1.6k
views
Create list of genes within each GOslim term
gene ontology
goslim
enrichment analysis
gene annotation
9.1 years ago
mirko
• 0
6 results • Page
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Comment: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
by
caroline.zanchi
▴ 10
Thank you ! ![enter image description here][1] In the end I did ```r rn2 <- select(org.Dm.eg.db, row.names(cent_expr_matrix), "GENENAME"…
Answer: Memory issue while using "quickcluster" and "computeSumFactors" functions on sin
by
James W. MacDonald
68k
The obvious solution is to use cloud computing, which is likely cheaper than getting more RAM for your computer.
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
by
James W. MacDonald
68k
``` library(org.Dm.eg.db) rn <- select(org.Dm.eg.db, row.names(cent_expr_matrix), "SYMBOL","FLYBASE") ## ensure no NA values get propaga…
Comment: Discrepancies in normalised count data vs unnormalised
by
AMgroup
• 0
Thank you for your explanation, that makes sense. Do you have any suggestions on how to deal with this issue? if it is an issue? especially…
Comment: Announcing GBCC 2025: The first-ever joint conference between Bioconductor and G
by
nytwordlehints
• 0
I have always had a great fondness for games, so witnessing their transformation into animated versions is truly a delightful experience. […
Votes
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Answer: Adding gene names as row annotations to an RNAseq heatmap made with ComplexHeatm
Deseq2 DE analysis of host-pathogen samples (model separately or jointly?)
Comment: Check removeBatchEffect effectiveness
Answer: Check removeBatchEffect effectiveness
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