Bioconductor Hdf5array

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3.4k

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hdf5array biocparallel

updated 5.9 years ago by Mike Smith ★ 6.5k • written 6.0 years ago by cath ▴ 30

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1.4k

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DelayedArray HDF5Array

updated 2.9 years ago by Hervé Pagès 16k • written 2.9 years ago by Pedro Baldoni ▴ 40

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1.7k

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TileDBArray HDF5Array MultiAssayExperiment

3.2 years ago Thomas Sandmann ▴ 90

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969

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HDF5Array

updated 2.6 years ago by Mike Smith ★ 6.5k • written 2.6 years ago by eric.kern13 ▴ 20

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HDF5Array dgCMatrix

updated 6.1 years ago by Aaron Lun ★ 28k • written 6.1 years ago by rubi ▴ 110

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HDF5Array

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by sarah.williams1 ▴ 40

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658

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HDF5Array

updated 7 weeks ago by Akshay • 0 • written 5 months ago by Sarah ▴ 10

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1.1k

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HDF5Array DelayedArray

2.8 years ago Koki ▴ 10

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1.8k

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HDF5Array DelayedArray

updated 7 months ago by Hervé Pagès 16k • written 2.6 years ago by Koki ▴ 10

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2.2k

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HDF5Array SingleCellExperiment DelayedArray

20 months ago merv ▴ 120

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1.3k

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HDF5Array DelayedArray

updated 2.9 years ago by Hervé Pagès 16k • written 2.9 years ago by Pedro Baldoni ▴ 40

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190

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HDF5Array BiocGenerics BiocParallel Biobase

19 days ago • updated 13 days ago jacques.imbert • 0

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1.6k

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HDF5Array SingleCellExperiment DelayedArray

19 months ago merv ▴ 120

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1.5k

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DelayedArray TileDBArray HDF5Array

updated 2.9 years ago by Hervé Pagès 16k • written 3.0 years ago by Koki ▴ 10

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1.1k

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bit64 HDF5Array DelayedArray

updated 2.9 years ago by Hervé Pagès 16k • written 2.9 years ago by Koki ▴ 10

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1.1k

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HDF5Array DelayedArray

3.0 years ago Koki ▴ 10

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1.1k

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rhdf5 HDF5Array anndata SingleCellExperiment

updated 20 months ago by Peter Hickey ▴ 740 • written 20 months ago by merv ▴ 120

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1.8k

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lumi illumina hdf5array

updated 5.7 years ago by James W. MacDonald 65k • written 5.7 years ago by Alexander Azarian ▴ 30

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1.1k

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DelayedArray HDF5Array

3.0 years ago Koki ▴ 10

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503

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HDF5Array

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by gabriele.favaretto • 0

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1.0k

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HDF5Array SingleCellExperiment DelayedArray

20 months ago merv ▴ 120

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876

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TileDBArray HDF5Array DelayedArray

2.9 years ago Koki ▴ 10

22 results • Page 1 of 1

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Answer: Store output of matchPWM() by James W. MacDonald 65k

Something like this? ``` ind <- as.logical(sapply(hitlist, length)) out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) …

Answer: log2FoldChange value is way too different when compared with counts(dds) by Michael Love 41k

This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…

Answer: Get genomic coordinates of CpGs sites (chromosomes, genomic position) by James W. MacDonald 65k

You don't say what array that is, so I will guess. ``` > library(IlluminaHumanMethylationEPICanno.ilm10b4.hg19) > Locations DataFrame…

Answer: SGSeq: moving toward diffex from SGSeq analysis by Leonard Goldstein ▴ 200

`vid` and `eid` are unique identifiers for splice variants and splicing events respectively. They are analogous to exon bin and gene identi…

Comment: Help with error using camera() in limma by Chris • 0

Thanks James! I fixed the error. I try gene symbol instead of entrez and it worked.

Votes

SPIA plotP giving error

Answer: Fold change calculation in Diffbind vs. DESEQ2?

C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB

C: Extremely big genes in annotation TxDb packages

Make custom Txdb class objects from Txdb

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