Showing : hopach • reset
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Hopach: distancematrix and distancevector do not return identical results
documentation bug hopach euclidean distance
3.6 years ago txema.heredia • 0
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5
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HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 10.5 years ago by ▴ 110 • written 10.5 years ago by • 0
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3
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hopach generates a wrong output
hopach
10.8 years ago • updated 10.7 years ago Alogmail2@aol.com ▴ 90
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displaying clustering results in TreeView or MapleTree
Microarray Clustering Kidney Ovarian probe hopach Microarray Clustering Kidney Ovarian
13.7 years ago Mark Baumeister ▴ 40
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 13.9 years ago by ▴ 430 • written 13.9 years ago by ▴ 10
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13
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3.0k
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Bioconductor Digest, Vol 87, Issue 10
Clustering hopach Clustering hopach
updated 15.4 years ago by ▴ 160 • written 15.4 years ago by ▴ 130
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
16.0 years ago Samuel GRANJEAUD - IR/ICIM ▴ 60
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
16.3 years ago Paolo Innocenti ▴ 320
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
updated 16.4 years ago by 6.7k • written 16.4 years ago by ▴ 320
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Hopach cluster quality metrics
hopach hopach
17.0 years ago Khan, Anar ▴ 30
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HOPACH and .cdt which doesn't work with javatreeview
Clustering hopach Clustering hopach
17.1 years ago Sébastien Tourlet ▴ 20
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1
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1.4k
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HOPACH clustering of genes
Clustering hopach Clustering hopach
updated 17.2 years ago by ▴ 20 • written 17.2 years ago by ▴ 100
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Why makeoutput() function is not included in hopach 1.4.3 version
Microarray Clustering hopach Microarray Clustering hopach
17.3 years ago Suprabhath Reddy ▴ 10
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1
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1.2k
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How to extract Hopach MSS value
Clustering hopach Clustering hopach
updated 17.7 years ago by 6.7k • written 17.7 years ago by ▴ 20
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1
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3.2k
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ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 18.8 years ago by 68k • written 18.8 years ago by ▴ 510
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1.1k
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hopach and heatmap
Clustering hopach Clustering hopach
19.3 years ago Ivan Baxter ▴ 60
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1.1k
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About Hopach package
hopach hopach
20.0 years ago kpollard ▴ 110
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About Hopach package
Clustering hopach Clustering hopach
20.1 years ago z3076426@student.unsw.edu.au ▴ 10
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How to use distance functions from hopach package in a heatmap?
hopach hopach
20.3 years ago kpollard ▴ 110
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1
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1.2k
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R terminated when i try HOPACH in a loop,why?
hopach hopach
updated 20.4 years ago by ★ 7.4k • written 20.4 years ago by ▴ 90
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1.1k
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(no subject)
hopach hopach
20.5 years ago kpollard ▴ 110
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[BioC}: export Hopoah to treeview
hopach hopach
20.6 years ago Anthony Bosco ▴ 500
22 results • Page 1 of 1
Recent ...
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Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k
107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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