Showing : hopach • reset
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Hopach: distancematrix and distancevector do not return identical results
documentation bug hopach euclidean distance
2.8 years ago txema.heredia • 0
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HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.6 years ago by ▴ 110 • written 9.7 years ago by • 0
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hopach generates a wrong output
hopach
10.0 years ago • updated 9.9 years ago Alogmail2@aol.com ▴ 90
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displaying clustering results in TreeView or MapleTree
Microarray Clustering Kidney Ovarian probe hopach Microarray Clustering Kidney Ovarian
12.9 years ago Mark Baumeister ▴ 40
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 13.1 years ago by ▴ 430 • written 13.1 years ago by ▴ 10
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Bioconductor Digest, Vol 87, Issue 10
Clustering hopach Clustering hopach
updated 14.6 years ago by ▴ 160 • written 14.6 years ago by ▴ 130
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
15.2 years ago Samuel GRANJEAUD - IR/ICIM ▴ 60
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
15.5 years ago Paolo Innocenti ▴ 320
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
updated 15.6 years ago by 6.7k • written 15.6 years ago by ▴ 320
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Hopach cluster quality metrics
hopach hopach
16.1 years ago Khan, Anar ▴ 30
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HOPACH and .cdt which doesn't work with javatreeview
Clustering hopach Clustering hopach
16.3 years ago Sébastien Tourlet ▴ 20
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HOPACH clustering of genes
Clustering hopach Clustering hopach
updated 16.4 years ago by ▴ 20 • written 16.4 years ago by ▴ 100
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Why makeoutput() function is not included in hopach 1.4.3 version
Microarray Clustering hopach Microarray Clustering hopach
16.5 years ago Suprabhath Reddy ▴ 10
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How to extract Hopach MSS value
Clustering hopach Clustering hopach
updated 16.9 years ago by 6.7k • written 16.9 years ago by ▴ 20
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ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 18.0 years ago by 67k • written 18.0 years ago by ▴ 510
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hopach and heatmap
Clustering hopach Clustering hopach
18.5 years ago Ivan Baxter ▴ 60
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About Hopach package
hopach hopach
19.2 years ago kpollard ▴ 110
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About Hopach package
Clustering hopach Clustering hopach
19.3 years ago z3076426@student.unsw.edu.au ▴ 10
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How to use distance functions from hopach package in a heatmap?
hopach hopach
19.4 years ago kpollard ▴ 110
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1
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1.1k
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R terminated when i try HOPACH in a loop,why?
hopach hopach
updated 19.6 years ago by ★ 7.4k • written 19.6 years ago by ▴ 90
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(no subject)
hopach hopach
19.7 years ago kpollard ▴ 110
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[BioC}: export Hopoah to treeview
hopach hopach
19.7 years ago Anthony Bosco ▴ 500
22 results • Page 1 of 1
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Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Aaron Lun ★ 28k
You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…
Comment: contrast matrix design for a continuous variable by dtzhu337 • 0
Thank you, Gordon. X is time splines for time point, and yes, it's needed. However, I was also thinking to incorporate time point with se…
Answer: contrast matrix design for a continuous variable by Gordon Smyth 52k
Yes, the design and contrasts are correct. Your analysis is also adjusted for covariates defined by X, which I assume is what you want to …
Comment: fail to use addPerROIQC in Rmd by liu.n • 0
That's odd. So it can run successfully within markdown but would be failed when knitting?
Comment: fail to use addPerROIQC in Rmd by joseph.joonsang • 0
> dim(spe) [1] 19962 425
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Answer: contrast matrix design for a continuous variable
A: What's the difference between p.adjust and qvalue?
Answer: DESeq2- merging technical vs biological replicates
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
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