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hopach
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0
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Hopach: distancematrix and distancevector do not return identical results
documentation
bug
hopach
euclidean
distance
3.9 years ago
txema.heredia
• 0
1
vote
5
replies
6.5k
views
HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 10.8 years ago by
kpollard
▴ 110 • written 10.8 years ago by
ejliaw
• 0
0
votes
3
replies
1.5k
views
hopach generates a wrong output
hopach
11.1 years ago • updated 11.0 years ago
Alogmail2@aol.com
▴ 90
0
votes
0
replies
1.8k
views
displaying clustering results in TreeView or MapleTree
Microarray
Clustering
Kidney
Ovarian
probe
hopach
Microarray
Clustering
Kidney
Ovarian
14.0 years ago
Mark Baumeister
▴ 40
0
votes
1
reply
1.8k
views
CRAN packages maintained by you
hexbin
gpls
RBGL
impute
Icens
hopach
maanova
RLMM
CORREP
cycle
hexbin
gpls
RBGL
Icens
updated 14.2 years ago by
Nicholas Lewin-Koh
▴ 430 • written 14.2 years ago by
Kurt Hornik
▴ 10
0
votes
13
replies
3.2k
views
Bioconductor Digest, Vol 87, Issue 10
Clustering
hopach
Clustering
hopach
updated 15.7 years ago by
Richard Pearson
▴ 160 • written 15.7 years ago by
avinash gupta
▴ 130
0
votes
0
replies
1.3k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
16.3 years ago
Samuel GRANJEAUD - IR/ICIM
▴ 60
0
votes
0
replies
1.2k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
16.6 years ago
Paolo Innocenti
▴ 320
0
votes
2
replies
1.6k
views
Problem with Hopach: "Error in dmat[ord, ]"
drosophila2
hopach
drosophila2
hopach
updated 16.7 years ago by
Vincent J. Carey, Jr.
6.7k • written 16.7 years ago by
Paolo Innocenti
▴ 320
0
votes
0
replies
1.1k
views
Hopach cluster quality metrics
hopach
hopach
17.3 years ago
Khan, Anar
▴ 30
0
votes
0
replies
1.2k
views
HOPACH and .cdt which doesn't work with javatreeview
Clustering
hopach
Clustering
hopach
17.4 years ago
Sébastien Tourlet
▴ 20
0
votes
1
reply
1.4k
views
HOPACH clustering of genes
Clustering
hopach
Clustering
hopach
updated 17.5 years ago by
Shannon, William
▴ 20 • written 17.5 years ago by
Nathan Harmston
▴ 100
0
votes
0
replies
1.0k
views
Why makeoutput() function is not included in hopach 1.4.3 version
Microarray
Clustering
hopach
Microarray
Clustering
hopach
17.6 years ago
Suprabhath Reddy
▴ 10
0
votes
1
reply
1.2k
views
How to extract Hopach MSS value
Clustering
hopach
Clustering
hopach
updated 18.0 years ago by
Vincent J. Carey, Jr.
6.7k • written 18.0 years ago by
Prateek Singh
▴ 20
0
votes
1
reply
3.3k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase
genefilter
affydata
limma
simpleaffy
hopach
affyio
Biobase
genefilter
affydata
updated 19.1 years ago by
James W. MacDonald
68k • written 19.1 years ago by
Georg Otto
▴ 510
0
votes
0
replies
1.2k
views
hopach and heatmap
Clustering
hopach
Clustering
hopach
19.6 years ago
Ivan Baxter
▴ 60
0
votes
0
replies
1.2k
views
About Hopach package
hopach
hopach
20.4 years ago
kpollard
▴ 110
0
votes
0
replies
1.0k
views
About Hopach package
Clustering
hopach
Clustering
hopach
20.4 years ago
z3076426@student.unsw.edu.au
▴ 10
0
votes
0
replies
1.2k
views
How to use distance functions from hopach package in a heatmap?
hopach
hopach
20.6 years ago
kpollard
▴ 110
0
votes
1
reply
1.2k
views
R terminated when i try HOPACH in a loop,why?
hopach
hopach
updated 20.7 years ago by
Seth Falcon
★ 7.4k • written 20.7 years ago by
Xiao Shi
▴ 90
0
votes
0
replies
1.1k
views
(no subject)
hopach
hopach
20.9 years ago
kpollard
▴ 110
0
votes
0
replies
1.1k
views
[BioC}: export Hopoah to treeview
hopach
hopach
20.9 years ago
Anthony Bosco
▴ 500
22 results • Page
1 of 1
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Comment: Pairwise comparison of multiple groups with different base
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ja569116
• 0
Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…
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Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…
Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
ja569116
• 0
Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
Answer: limpa analysis advice
by
Gordon Smyth
53k
It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…
Answer: When to use edgeR or limma
by
Gordon Smyth
53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Votes
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
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