Showing : htseq • reset
0
votes
2
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1.2k
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DEXSeqDataSet object DEXSeqDataSetFromHTSeq Error: line number did not have 3 elements
DEXSeq HTSeq R
2.2 years ago yr542 • 0
1
vote
6
replies
1.7k
views
low counts from microRNA seq
DESeq2 microRNA HTSeq
2.9 years ago abhay.kanodia • 0
0
votes
1
reply
1.3k
views
Error in DESeqDataSetFromHTSeqCount
DESeq2 RNA-seq HTseq DESeqDataSetFromHTSeqCount
updated 2.9 years ago by 43k • written 3.0 years ago by • 0
0
votes
2
replies
1.3k
views
RNA-Seq Reads Count
DESeq2 htseq DEGseq RNASeq read
updated 3.0 years ago by 43k • written 3.0 years ago by • 0
0
votes
2
replies
1.6k
views
Problems while installing HTSeqGenie and gmapR
software error HTSeq installation
updated 5.7 years ago by 25k • written 5.7 years ago by • 0
12
votes
4
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5.3k
views
differential expression analysis of htseq data with edgeR/voom
voom htseq edgeR limma RNASeq123
updated 6.8 years ago by 53k • written 8.4 years ago by ▴ 30
0
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1
reply
2.0k
views
counting with htseq script in DEXSeq
DEXSeq dexseq_count htseq
8.7 years ago mat.lesche ▴ 110
1
vote
6
replies
2.5k
views
Error: could not find function "HTSeqCounts"
HTSeq HTSeqCounts Could not find function DEXSeq
updated 9.5 years ago by 25k • written 9.5 years ago by ▴ 10
8 results • Page 1 of 1
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Comment: featureCounts -L: high unassigned:mapq fraction by eja.gssssssse.r.m • 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Kevin Blighe ★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Answer: VariantAnnotation does escape = within header string quotes by Kevin Blighe ★ 4.0k
Hi, Thanks for the minimal reproduction - this is very clear and confirms a bug in `VariantAnnotation::writeVcf()`. The issue is that th…
Answer: Setting up a DESeq2 Design with Paired Data by Kevin Blighe ★ 4.0k
Hello, Your design formula looks mostly correct to me, but I believe that `vessel_n` should be `replicate` (or whatever unique identifie…
Comment: Failure to download resources (MeSHDb) from AnnotationHub by Steve Lianoglou ★ 13k
That fixed it, thanks Lori!
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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