Bioconductor Htseq

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HTSeq HTSeqCounts Could not find function DEXSeq

updated 8.1 years ago by Martin Morgan 25k • written 8.1 years ago by sakura.nussbaum ▴ 10

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4.4k

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voom htseq edgeR limma RNASeq123

updated 5.3 years ago by Gordon Smyth 50k • written 6.9 years ago by wd ▴ 30

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726

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DESeq2 RNA-seq HTseq DESeqDataSetFromHTSeqCount

updated 17 months ago by Michael Love 42k • written 17 months ago by abhay.kanodia • 0

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1.0k

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DESeq2 microRNA HTSeq

16 months ago abhay.kanodia • 0

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714

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DESeq2 htseq DEGseq RNASeq read

updated 18 months ago by Michael Love 42k • written 18 months ago by CP • 0

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567

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DEXSeq HTSeq R

9 months ago • updated 8 months ago yr542 • 0

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1.1k

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software error HTSeq installation

updated 4.2 years ago by Martin Morgan 25k • written 4.2 years ago by eric33150 • 0

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1.5k

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DEXSeq dexseq_count htseq

7.2 years ago mat.lesche ▴ 90

8 results • Page 1 of 1

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Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.