Bioconductor Hugene20

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microarray hugene20 limma oligo

updated 8.7 years ago by Aaron Lun ★ 28k • written 8.8 years ago by hakimelakhrass • 0

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hugene20 microarray limma limma paired analysis oligo

8.8 years ago hakimelakhrass • 0

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2.6k

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limma microarray pd.hugene.2.0.st hugene20 oligo

8.8 years ago hakimelakhrass • 0

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hugene20 heatmap affymetrixchip

updated 9.5 years ago by alakatos ▴ 130 • written 9.5 years ago by kanacska ▴ 10

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microarray annotation hgu133plus2 hugene20

9.6 years ago kanacska ▴ 10

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affy pd.hugene.2.0.st hugene20 annotation microarray

9.6 years ago kanacska ▴ 10

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xps hugene20

updated 10.1 years ago by cstrato ★ 3.9k • written 10.1 years ago by Alison Ziesel ▴ 60

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Answer: DESeq Input from Salmon + tximport/tximeta by Michael Love 42k

Given nf-core's pipeline here, you can use rounded counts from `gene_counts_length_scaled.tsv`.

Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim by josephjohnsonlo • 0

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Comment: Question about using LRT test for time course experiments with DESeq2 by James W. MacDonald 67k

You don't want to add a logFC on top like that, as it invalidates the p-value. Maybe I wasn't clear before. The LRT gives you all the gene…

Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0

Hi James, Thank you very much for your very detailed explanation! I guess my question is simpler than that, I just want to union, across…

Answer: featureCounts segmentation fault with large chromosomes by vkkodali ▴ 10

Thanks to @yangliao this issue is fixed in subread v2.0.8

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Answer: featureCounts segmentation fault with large chromosomes

Answer: Supercells with Basilisk fails for dtype('float64') to dtype('int64') conversion

Comment: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu

Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?

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