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Showing :
intersect
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reset
5
votes
9
replies
9.1k
views
subsetByOverlaps : comparing GRANGES and keeping all the information in the METACOLUMNS
granges
bedtools
intersect
updated 5.7 years ago by
lee.s
▴ 70 • written 5.7 years ago by
Bogdan
▴ 670
0
votes
9
replies
2.7k
views
IRanges: reduce(), findOverlaps(), and intersect() by group
iranges
findoverlaps
intersect
group
8.4 years ago
pesquivel
• 0
2
votes
8
replies
5.3k
views
GenomicRanges: identify overlapping regions, get intersection between each overlapping pair and add gene coordinates (start, end, strand and ids)
genomicranges
overlap
intersect
findoverlaps
6.3 years ago
Caroline Grisbach Meissner
▴ 10
3
votes
5
replies
1.6k
views
Extract coordinates of overlapping genomic intervals
genomicranges
findoverlaps
intersect
updated 7.7 years ago by
Steve Lianoglou
★ 13k • written 7.7 years ago by
rubi
▴ 110
0
votes
4
replies
3.3k
views
[Solved]Preserve metadata column for retrieving common regions from two GRanges objects
granges
intersect
8.1 years ago
Jurat Shahidin
▴ 80
5
votes
2
replies
556
views
Intersecting two big dataframe
genomicrange
intersect
updated 4.1 years ago by
James W. MacDonald
65k • written 4.1 years ago by
AZ
▴ 30
6
votes
2
replies
4.7k
views
How to get the intersect and get the difference of a grange object while keeping meta data
genomicranges
intersect
updated 7.9 years ago by
shepherl
3.9k • written 8.0 years ago by
zlskidmore
▴ 30
0
votes
2
replies
890
views
feel confused when identifying overlapping regions by intersect method
GenomicRanges
overlaps
intersect
updated 5.2 years ago by
Michael Lawrence
★ 11k • written 5.2 years ago by
fjia304
• 0
0
votes
1
reply
898
views
intersect ranges from a GAlignment object with a GRangesList
intersect
grangeslist
galignment
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
ccanchaya
• 0
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gene_bioconductor
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Thanks for your thoughtful and detailed comment, Gordon
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• 0
I looked into the genomic distributions. Please see the screenshot attatched ![ distrubution for female loci, boot1 and boot2][1] how do …
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If you look at the output here: https://bioconductor.org/packages/release/bioc/vignettes/DEXSeq/inst/doc/DEXSeq.html#4_Testing_for_differe…
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As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…
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Answer: Method to find pathways different between 2 groups
Answer: Method to find pathways different between 2 groups
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Method to find pathways different between 2 groups
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