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Showing :
intersect
•
reset
5
votes
9
replies
9.0k
views
subsetByOverlaps : comparing GRANGES and keeping all the information in the METACOLUMNS
granges
bedtools
intersect
updated 5.7 years ago by
lee.s
▴ 70 • written 5.7 years ago by
Bogdan
▴ 670
0
votes
9
replies
2.7k
views
IRanges: reduce(), findOverlaps(), and intersect() by group
iranges
findoverlaps
intersect
group
8.4 years ago
pesquivel
• 0
2
votes
8
replies
5.3k
views
GenomicRanges: identify overlapping regions, get intersection between each overlapping pair and add gene coordinates (start, end, strand and ids)
genomicranges
overlap
intersect
findoverlaps
6.3 years ago
Caroline Grisbach Meissner
▴ 10
3
votes
5
replies
1.6k
views
Extract coordinates of overlapping genomic intervals
genomicranges
findoverlaps
intersect
updated 7.7 years ago by
Steve Lianoglou
★ 13k • written 7.7 years ago by
rubi
▴ 110
0
votes
4
replies
3.3k
views
[Solved]Preserve metadata column for retrieving common regions from two GRanges objects
granges
intersect
8.1 years ago
Jurat Shahidin
▴ 80
5
votes
2
replies
545
views
Intersecting two big dataframe
genomicrange
intersect
updated 4.1 years ago by
James W. MacDonald
65k • written 4.1 years ago by
AZ
▴ 30
6
votes
2
replies
4.7k
views
How to get the intersect and get the difference of a grange object while keeping meta data
genomicranges
intersect
updated 7.9 years ago by
shepherl
3.8k • written 8.0 years ago by
zlskidmore
▴ 30
0
votes
2
replies
879
views
feel confused when identifying overlapping regions by intersect method
GenomicRanges
overlaps
intersect
updated 5.2 years ago by
Michael Lawrence
★ 11k • written 5.2 years ago by
fjia304
• 0
0
votes
1
reply
890
views
intersect ranges from a GAlignment object with a GRangesList
intersect
grangeslist
galignment
updated 6.9 years ago by
Hervé Pagès
16k • written 6.9 years ago by
ccanchaya
• 0
9 results • Page
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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