Bioconductor Karyoploter

Showing : karyoploter • reset

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743

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TxDb.Mmusculus.UCSC.mm10.ensGene TxDb karyoploteR

15 months ago remi-xavier.coux ▴ 10

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1.1k

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GenomicFeatures karyoploteR TxDb.Hsapiens.UCSC.hg19.knownGene

2.9 years ago Shreyash ▴ 10

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2.6k

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BSgenome.Athaliana.TAIR.TAIR10. karyoploteR BSgenome

updated 3.4 years ago by James W. MacDonald 68k • written 3.4 years ago by rtt100 • 0

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1.3k

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KaryoploteR

updated 5.5 years ago by Kevin Blighe ★ 4.0k • written 5.5 years ago by mpigozzi • 0

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4.5k

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karyoploter

updated 6.5 years ago by bernatgel ▴ 150 • written 6.5 years ago by Aditya ▴ 160

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1.9k

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karyoploteR

updated 6.9 years ago by bernatgel ▴ 150 • written 6.9 years ago by saeed Ur Rehman • 0

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2.5k

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software error R bsgenome karyoploter

updated 8.3 years ago by bernatgel ▴ 150 • written 8.3 years ago by kirannbishwa01 ▴ 20

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1.8k

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karyoploter

updated 8.5 years ago by bgel ▴ 10 • written 8.5 years ago by spr ▴ 10

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1.4k

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KaryoploteR

8.6 years ago Radek ▴ 90

9 results • Page 1 of 1

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Comment: tximeta cannot open annotation gtf? by Michael Love 43k

Yes, so this is the same type of error you would get if you tried to assemble a *SummarizedExperiment* manually with tximport + GTF process…

Answer: tximeta cannot open annotation gtf? by ATpoint ★ 5.0k

> Timeout of 60 seconds was reached You have to increase the default timeout limits for downloads, `options(timeout=3600)`. GENCODE serve…

Answer: GSEA error by James W. MacDonald 68k

At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Votes

Answer: GSEA error

Answer: OrgDb for maize

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

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