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KaryoploteR
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1
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txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome
TxDb.Mmusculus.UCSC.mm10.ensGene
TxDb
karyoploteR
15 months ago
remi-xavier.coux
▴ 10
1
vote
0
replies
1.1k
views
Make custom Txdb class objects from Txdb
GenomicFeatures
karyoploteR
TxDb.Hsapiens.UCSC.hg19.knownGene
2.9 years ago • updated 2.8 years ago
Shreyash
▴ 10
9
votes
5
replies
2.6k
views
karyoploteR genome coverage plotting using BSgenome.TAIR10
BSgenome.Athaliana.TAIR.TAIR10.
karyoploteR
BSgenome
updated 3.4 years ago by
James W. MacDonald
68k • written 3.4 years ago by
rtt100
• 0
0
votes
1
reply
1.3k
views
KaryoploteR: error using galGal6 genome
KaryoploteR
updated 5.5 years ago by
Kevin Blighe
★ 4.0k • written 5.5 years ago by
mpigozzi
• 0
4
votes
5
replies
4.5k
views
How to add a color legend to plotKaryotype and kpPlotRegions ?
karyoploter
updated 6.5 years ago by
bernatgel
▴ 150 • written 6.5 years ago by
Aditya
▴ 160
0
votes
1
reply
1.9k
views
Bioconductor - Karyoploter | Visualization | Multiple Chromosome display issue
karyoploteR
updated 6.9 years ago by
bernatgel
▴ 150 • written 6.9 years ago by
saeed Ur Rehman
• 0
0
votes
1
reply
2.5k
views
How to name the custom genome in karyoploteR ?
software error
R
bsgenome
karyoploter
updated 8.3 years ago by
bernatgel
▴ 150 • written 8.3 years ago by
kirannbishwa01
▴ 20
1
vote
2
replies
1.8k
views
KaryoploteR does not work on R.3.3.3
karyoploter
updated 8.4 years ago by
bgel
▴ 10 • written 8.4 years ago by
spr
▴ 10
0
votes
0
replies
1.4k
views
karyoploteR: custom genome axis $latest.plot
KaryoploteR
8.6 years ago
Radek
▴ 90
9 results • Page
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Answer: bcftools norm Equivalent
by
a2a2hd42aa
• 0
it lacks a direct, single function equivalent to bcftools norm for variant normalization. Bioinformaticians often bridge this gap by using …
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
by
A.Barden
▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions
by
Gordon Smyth
53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack
by
a2a2hd42aa
• 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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