Showing : macs • reset
0
votes
0
replies
863
views
MeDIP seq data analysis
medip_seq Macs
5.9 years ago Mar Mar ▴ 20
0
votes
1
reply
1.4k
views
How to find sites with H3K27me3 loss?
Chip Seq Histone H3K27me3 macs diffbind
6.4 years ago researcher • 0
2
votes
3
replies
11k
views
DiffBind for ATAC-seq
atac-seq diffbind macs2 macs peak finding
updated 8.9 years ago by ▴ 70 • written 9.4 years ago by ▴ 50
1
vote
2
replies
2.8k
views
MEDIPS vs MACS: why does MEDIPS generate more conservative p-values
p-value medips MACS
updated 10.7 years ago by ▴ 570 • written 10.7 years ago by • 0
4 results • Page 1 of 1
Recent ...
Replies
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA by A.Barden ▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available by Tikaaa2sahaaaq2c • 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
Awards • All
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to shepherl 4.3k
Popular Question to Steve Lianoglou ★ 13k
Teacher to Michael Love 43k
Supporter to fl ▴ 20
Locations • All
United Kingdom, 38 minutes ago
Barcelona, Spain, 1 hour ago
The city by the bay, 1 hour ago
Wageningen University, Wageningen, the Netherlands, 1 hour ago
United States, 3 hours ago
Traffic: 1210 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6