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HOMER
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0
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2
replies
2.4k
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HOMER error: Where is the file?
HOMER
chip-seq
updated 3.3 years ago by
ATpoint
★ 5.0k • written 3.3 years ago by
兆豪
• 0
0
votes
0
replies
1.6k
views
How to prepare HiCUP BAM output as input for HOMER?
HOMER
HiCUP
BAM
HiC
4.3 years ago
Ankit
▴ 20
0
votes
1
reply
2.2k
views
Identification of Overrepresented Transcription Factor Binding Motifs in the Promoters of a List of DE Genes
HOMER
Motif Analysis
updated 8.1 years ago by
Ou, Jianhong
★ 1.4k • written 8.1 years ago by
JMallory
• 0
1
vote
3
replies
3.4k
views
Using HOMER called peaks in DiffBind
diffbind
HOMER
8.2 years ago
Hesh
▴ 10
0
votes
1
reply
3.0k
views
Homer getDiffExpression.pl issue
homer
atac-seq
updated 8.6 years ago by
Maciej Jończyk
• 0 • written 8.6 years ago by
niu.shengyong
▴ 10
3
votes
2
replies
3.4k
views
Best way to get HiCUP-mapped Hi-C data into diffHiC
hicup
hi-c
diffhic
homer
8.6 years ago
e.jacobson
▴ 10
0
votes
1
reply
2.6k
views
Convert HOMER motif matrix to pfm?
homer
pwmenrich
updated 9.5 years ago by
Ou, Jianhong
★ 1.4k • written 9.5 years ago by
sarah.blackstone7734
• 0
7 results • Page
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Comment: Question on processing compound protein groups in limpa
by
JKim
• 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa
by
Gordon Smyth
53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input
by
Gordon Smyth
53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2
by
a2a2hset32aa
• 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts
by
a2a2hset32aa
• 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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