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msaPrettyPrint()
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2
votes
2
replies
4.8k
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How to get msa output in fasta format
msa
msaprettyprint()
updated 7.6 years ago by
UBod
▴ 300 • written 7.6 years ago by
cav3gh
• 0
0
votes
1
reply
1.9k
views
Status 1 error when using msaPrettyPrint() to make pdfs with MsaAAMultipleAlignment
msaprettyprint()
latex
pdf
msa
updated 7.9 years ago by
UBod
▴ 300 • written 7.9 years ago by
Cecil
• 0
2
votes
11
replies
7.4k
views
How do I extract the complete MsaAAMultipleAlignment object to a file
msaprettyprint()
msa
multiplealignment
export
updated 7.9 years ago by
UBod
▴ 300 • written 7.9 years ago by
Assa Yeroslaviz
★ 1.5k
8
votes
14
replies
12k
views
Using msa msaPrettyPrint(): saving multiple alignement fasta file
msa
msaprettyprint()
fasta
updated 8.5 years ago by
tongtong.wang1210
• 0 • written 8.9 years ago by
Olorin
▴ 50
1
vote
2
replies
1.8k
views
msaPrettyPrint cannot handle long sequences?
msa
msaprettyprint()
multiple sequence alignment
8.8 years ago
map2085
▴ 40
1
vote
1
reply
5.6k
views
Using msa msaPrettyPrint(): issues with latex
msa
latex
msaPrettyPrint()
8.9 years ago
Olorin
▴ 50
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Answer: problem reading bam files into nucleR
by
James W. MacDonald
68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
Answer: Question about DESeq2 Design for Paired Treatment Study
by
ATpoint
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It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR
by
efoss
▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma
by
Gordon Smyth
53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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