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Rscript tidyr dataframe tidyverse offtopic

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derfinderData SpikeInSubset musicatk Guitar offtopic

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RNA-Seq sequencer library_size sequency_depth multiplexing offtopic

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mygene offtopic

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Comment: EdgeR Biological CVs by ATpoint ★ 4.6k

"Joseph" is a spam bot...

Comment: Problems with oarfish + tximport + swish by Im • 0

Office ta kemon

Answer: How to sort negative log2FC or FC in RNAseq for GSEA? by ATpoint ★ 4.6k

GSEA asks whether there are general shifts in gene expression towards certain terms. Hence, you would not split your results tables but ord…

Comment: EdgeR Biological CVs by James • 0

Thank you Gordon and Joseph. I presume question (1) would be answered by using a prior G0 of 0? For question (2), I was expecting a biolog…

Comment: EdgeR Biological CVs by Joseph ▴ 10

I believe the published study provides answers to your questions. Yunshun Chen and Pedro Baldoni's recent papers on edgeR may also be of in…

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How to correct for tumor purity using DESeq2 to analyze TCGA tumor sample expression.