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pasilla
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1
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3
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Unable to reproduce Pasilla dataset which fresh instalation
tutorial
DESeq2
pasilla
3.2 years ago
Carina
• 0
1
vote
5
replies
1.4k
views
DESeq2: differential expression analysis from matrix count with gene annotation
deseq2
dataframe
pasilla
updated 5.1 years ago by
Michael Love
42k • written 5.1 years ago by
ecg1g15
▴ 20
1
vote
2
replies
2.2k
views
I can't install the pasilla package
pasilla
biocmanager
updated 5.5 years ago by
James W. MacDonald
65k • written 5.5 years ago by
Aurora
▴ 20
1
vote
2
replies
1.2k
views
trouble importing data for DEseq2 workflow
deseq2
tximport
tximportdata
pasilla
Tutorial
updated 5.6 years ago by
Michael Love
42k • written 5.6 years ago by
Stanley Yang
• 0
2
votes
2
replies
2.9k
views
DESeq2: resultsNames(dds): intercept
deseq2
pasilla
updated 6.8 years ago by
rrcutler
▴ 70 • written 6.8 years ago by
waquinon
• 0
0
votes
3
replies
2.4k
views
Difference between DESeq2 package version 1.16.1 and 1.14.1
deseq2
pasilla
updated 6.9 years ago by
Michael Love
42k • written 6.9 years ago by
jingjiaok
• 0
1
vote
2
replies
2.9k
views
DESeq - Change PCA axis from PasillaGuide to PC3 and PC4
deseq
pca
pasilla
updated 8.2 years ago by
Federico Marini
▴ 150 • written 8.2 years ago by
chqr
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Answer: Differential gene expression analysis results
by
ATpoint
★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Comment: deseq2 results
by
swbarnes2
★ 1.4k
It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Dylan.Sheerin
• 0
Thank you very much, Gordon. I'll give voomLmFit a go!
Votes
Comment: deseq2 results
Comment: deseq2 results
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
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